Niabella ginsenosidivorans: A8C56_08490
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Entry
A8C56_08490 CDS
T04418
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nia
Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nia03032
]
A8C56_08490
03400 DNA repair and recombination proteins [BR:
nia03400
]
A8C56_08490
Enzymes [BR:
nia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A8C56_08490
DNA replication proteins [BR:
nia03032
]
Prokaryotic type
DNA Topoisomerases
A8C56_08490
DNA repair and recombination proteins [BR:
nia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A8C56_08490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ANH81010
UniProt:
A0A1A9I2R4
LinkDB
All DBs
Position
complement(2031815..2034406)
Genome browser
AA seq
863 aa
AA seq
DB search
MAKNLLIVESPAKAKTIEKFLGKDFQVKSSFGHIRDLEKAGMGIDIDNQFHPRYVISDGK
EKVVRDLKNLASKSEEVWLATDEDREGEAISWHLCEVLGLNPNTTKRIVFNEITKPAIQQ
AVQSPRHVDMNLVDAQQARRVLDRIVGFELSPVLWRKISVKNNLSAGRVQSVAVRLIAER
EREINAFEPQSSFKISAIFTATDTNGKQVSFKAEGGRYQTAEDAEKFLQSCVNALYTVSD
IQVKPGKRTPAPPFTTSTLQQEASRKLGYSVSRTMQIAQQLYENGYITYMRTDSVNLSNT
ALNDLTNTIKSMYGGEYHQFRRFKNRNESAQEAHEAIRPTYMSNTAVEHNDWKRLYDLIW
KRTMACQMADAQLEKTTAKIRISTNKEELTANGEVIKFDGFLKIYNEGRDDEDIQEDELQ
EGMLPPLAVGQELPLVEMTGTERFTRPSPRYTEASLVKKLEELGIGRPSTYAPTISTILK
RGYVEKRDKEGIERKYRTLLLKENQLTPKEAVEITGAEKSKLFPTDLGLVVTDFLKQHFG
DIMDYGFTARIEGEFDEIASGKLQWNKLIDDFYHPFKGDVDNTIETAERIKGERELGMDP
ESGRPVFARMGRFGPMIQIGNADDEEKPRFATLRKGQSIETISFEEAMDLFKLPVTLGEH
EGKEVSVNIGRFGPYVKWGDDFISIPRAEDPFSVDMGRAVELIREKQAADAPVAHYEGKP
VTKGKGRFGPFIKWNELFINVPRRYDFDHLSQKDIEELIRAKMEKEANRYIQQWPEEKIA
LENGRWGAFIRFGKKMVKLGRKENGEKYTPEEVAQLPLETVKKMIEAELPGAFEKPAKKA
AAKKTAAKKTTVKKAAAKKKTGK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatttattgatagtagaaagccctgcaaaagcaaagaccattgaaaagttc
ctgggaaaagatttccaggtaaaaagcagcttcgggcacatccgtgatcttgaaaaagcg
ggaatgggaattgatattgacaatcagtttcacccccgttatgtgatttcagacggtaag
gaaaaagttgttcgcgatctgaaaaacctggcttccaaaagcgaggaagtatggctggca
acggatgaggaccgtgagggagaggcgatcagctggcatctttgtgaagtgcttggcctg
aatcccaacaccacaaagcgcatcgtttttaatgaaatcaccaaaccggccatccagcag
gccgttcaatcgcccaggcatgtagacatgaacctggtggatgcgcagcaggcacgccgt
gtattggaccgcatagtaggatttgagctcagcccggtcctgtggcggaagatcagcgtt
aaaaacaacctgagcgcaggccgcgtacaaagtgttgccgtacgtttaatagccgagcgg
gaacgggaaataaatgcttttgagccgcagagcagctttaaaatttccgcaatttttacc
gccacagacactaatggaaaacaggtttcttttaaagcagaaggtggcaggtatcaaaca
gcagaagatgcggagaaatttttacaatcctgtgtaaacgctctctatactgtaagcgac
attcaggtaaaaccgggaaaacgcaccccggctccgcctttcactacgtcaacattgcag
caggaagccagccggaaactggggtacagtgtcagccgcaccatgcagatcgcccagcag
ctttatgaaaacgggtatattacttatatgcgtacagacagtgtgaacctcagcaatacg
gcgcttaatgaccttaccaataccattaaaagtatgtatggcggagaatatcatcagttc
cggcgttttaagaacaggaatgagagcgcccaggaagcgcacgaagcgatccgccctacc
tacatgagcaatacggctgttgaacacaacgactggaaaagattgtatgacctgatctgg
aaacggacaatggcctgccagatggcagatgcgcagctggaaaaaacaacagcaaagatc
cggatatccaccaataaggaagaattgactgctaacggcgaggtgatcaaatttgacggg
tttctgaagatctataatgaaggcagggatgatgaagatatccaggaagatgaattacag
gaaggcatgttgcccccgctggctgttggccaggagcttccgttggttgagatgacaggc
accgagcgtttcacccggccttcacccaggtatacagaagcctcgctggtaaagaaactg
gaggaactggggatcgggcgcccctctacctatgcccctactatttccaccatcctgaaa
aggggctacgtggaaaagcgggataaggaaggtattgagcgcaaataccgcacccttctt
ttaaaagaaaaccagcttaccccaaaagaagctgttgaaattaccggtgcagaaaaatca
aaactgtttccaaccgatctggggctggtggtaaccgacttcttaaagcagcatttcggg
gatattatggactatggctttacagccaggattgagggagagtttgatgaaattgccagc
ggcaaactgcaatggaataagctcatcgatgatttctatcatccttttaaaggcgatgtg
gacaataccattgaaaccgcagagcgcataaaaggagaacgcgaattaggaatggacccc
gaaagcggccggcccgtttttgcgcgtatgggccgctttgggccgatgatccagatcggc
aatgcagatgatgaggaaaagccccgctttgctaccttacgcaaaggacagagcattgaa
accatttcttttgaggaagcaatggatcttttcaagctgccggttaccctgggtgaacat
gaagggaaagaagtttccgtaaatatcggccgcttcgggccctatgtaaaatggggcgat
gattttatttcgatccccagggctgaagatcccttctctgttgacatgggacgggccgtg
gaactgatcagggaaaaacaggctgcagacgctcctgttgcccattatgagggaaaacct
gtaacaaaaggcaaaggccggtttggcccgttcatcaaatggaatgagctgttcatcaat
gtgccccgccggtatgattttgatcatttatcacaaaaggatatagaggaactgatcagg
gcaaagatggaaaaagaagccaaccgttatattcagcaatggcccgaagaaaagatcgct
ctggaaaacggtcgctggggagcttttatccgctttggaaaaaagatggtcaaactggga
agaaaagagaacggtgaaaaatataccccggaagaagtggcgcagttaccactggaaacc
gtaaaaaaaatgatcgaggcggaactgcccggggcttttgaaaagcctgctaaaaaagcc
gctgcaaaaaagactgctgcaaagaaaacaacggttaagaaggcagccgcaaaaaagaaa
acaggaaaataa
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