Niabella ginsenosidivorans: A8C56_10295
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Entry
A8C56_10295 CDS
T04418
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nia
Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nia03009
]
A8C56_10295
Enzymes [BR:
nia01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A8C56_10295
Ribosome biogenesis [BR:
nia03009
]
Prokaryotic type
ribosomal protein modification factors
A8C56_10295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ANH81321
UniProt:
A0A1A9I3Q7
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All DBs
Position
complement(2464039..2465349)
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AA seq
436 aa
AA seq
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MKAKTLKKDKVNIITLGCSKNMVDSEVLSGQLKANEIDVVHENKKFDHNIVVVNTCGFID
KAKEESINTILEQVEYKKQGQLDKVYVTGCLSERYKNNLEEAIPEVDAFFGTMELPLILK
QFEADYKAELLGERLLTTPKHYAYLKISEGCNRTCSFCAIPLMRGRHVSRPVDQLVAEAE
NLVKMGVKEMMLIAQELTYYGLDIYKKRMLPDLLNRLADIKGLEWIRLHYAYPTKFPLEV
LDVMRERDNICNYLDMPLQHASDNMLKAMKRQITRGEMEDLVSAIREKVPGICLRTTLIA
GFPGETLDDIEELKQFLAKERFDRVGIFTYSHEEDTSAYALADTIPQEEKERRAQEIMEF
QQELSYELNQEKVGKTFKTLIDKKEAGRYIGRTEFDSVEVDNEVIIAGTAPLKTGEFYNV
KIERAYDYDLEGVVVK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcaaaaacattaaaaaaagataaggtcaatattattaccctggggtgcagtaaa
aatatggtggacagcgaggtgctgagtggccagctgaaggcgaatgaaattgacgtggtg
catgagaataagaagttcgatcataatattgttgtggtcaacacctgcggttttattgat
aaggcgaaagaggaaagcatcaataccatcctggaacaggtagaatataaaaagcagggt
cagctggataaagtatatgtgaccggttgcttaagcgagcgctataaaaataaccttgag
gaagcgattccggaagtggatgcttttttcggcacaatggagctgccgctgatcctgaag
cagtttgaagcagattataaagcagaattattaggcgagcgcctgctgaccactcctaaa
cattatgcgtatctaaaaatttcagaaggctgtaaccgtacctgttctttttgtgccatt
cctttaatgcgcggccggcatgtgagcaggcctgttgatcaactggtggcagaagcggag
aacctggtgaagatgggcgtaaaggaaatgatgctgatcgcccaggagctgacttattac
ggcctggatatttataagaaaagaatgctgcccgatctgctgaaccggctggcggatatt
aaaggcctggagtggatccgcctgcattatgcatatcctaccaaatttcctctggaggtg
ctggatgtgatgcgggagcgggacaatatctgcaattacctggatatgcccctgcagcat
gcatctgataacatgctgaaggccatgaaacgccagatcacccggggggaaatggaagac
ctggtaagtgctatccgcgaaaaagtgcccggtatttgcctgcgtaccacgctgatcgcg
ggcttcccgggggaaacattggatgatatagaagaattgaaacagtttttagcaaaagaa
cgctttgaccgtgtgggtatttttacttactcgcatgaagaagataccagcgcttatgca
ctggctgacaccattccgcaggaagaaaaggagcggagggcacaggaaataatggagttc
cagcaggagctctcttatgagctgaaccaggaaaaagtaggaaaaacgttcaaaacactg
atcgataaaaaggaagccgggcgttatattggccgtacggaatttgacagtgtggaagtg
gataatgaagtgatcattgccggaactgctccgttaaagaccggtgaattctataatgtg
aaaattgaaagggcctatgattacgacctggaaggggtggtggtgaaatga
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