Niabella ginsenosidivorans: A8C56_11740
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Entry
A8C56_11740 CDS
T04418
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nia
Niabella ginsenosidivorans
Pathway
nia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8C56_11740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nia03019
]
A8C56_11740
03016 Transfer RNA biogenesis [BR:
nia03016
]
A8C56_11740
Enzymes [BR:
nia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A8C56_11740
Messenger RNA biogenesis [BR:
nia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A8C56_11740
Transfer RNA biogenesis [BR:
nia03016
]
Prokaryotic type
tRNA degradation factors
A8C56_11740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
Glyco_hydro_46
Motif
Other DBs
NCBI-ProteinID:
ANH81554
UniProt:
A0A1A9I4S3
LinkDB
All DBs
Position
complement(2825119..2827305)
Genome browser
AA seq
728 aa
AA seq
DB search
MLQQPIRKVFDIGDGREVTIETGRLARQADGSVTVSMGKCMLLATVVANKEPKEGQSFFP
LTVDYQEKFASAGRIPGSFFKREGRLSDYEVLTSRLIDRALRPLFPDDYLCEVQVLVTLI
SSDPEILPDAMACLAASAALAVSDVPIKEIISEVRIGRVNGQFKINPTRSEMENSDMDFI
IAATEKNLMMVEGESEECSEDDLVAALGVAHEAIRVQIKAQEELRALKGVSGKREYTKPA
QDEALREKVYGFAQSKVYEVAKGKLGKHERTDRFEAIEEEMLKSFEEAATEEAPFTDEQK
KMAKNYFHDLQYDVVRDMILNERIRLDGRSLTEIRPLDMEVDVLPSPHGSALFTRGETQS
LTTVTLGTALDELLVESAAKSEYSKFILHYNFPPFSTGEVKMMRGPGRREVGHGNLAMRS
LKQMMPDSGDDFGYTVRVVSDILESNGSSSMATVCAGSLALMDAGVPIPKHVSGIAMGLI
TKEEKFAILSDILGDEDHLGDMDFKVTGTRDGICGVQMDIKVDGLPMEVMKQALEQAKAG
RLHILEAMYKTIPEARAEVKPHAPRVVKMFIDKEFIGAVIGPGGKVIQEMQRETGTTINI
EEVNNRGEISIFGIEKTAVEKAENWIKGIVAVPVVGEVYDAVVKGIKEFGAFVEFLPGKQ
GLVHISEISWKRLETLDGVVKEGDSMKVKLIGTDPKSGKFKLSRKALIPRPEKKENKGEA
SSPASGNN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacaacctatcagaaaggtatttgatataggagatggaagagaagtgaccata
gaaaccggccgcctggcccgccaggccgatggatcagtgacggtgtctatgggtaaatgt
atgttgctggctactgtagtagccaataaagaacccaaggaaggccagagcttttttcct
ttaacggtggactatcaggagaagtttgcttctgccggccgtataccgggctctttcttt
aaaagggaaggccgtttgagcgattatgaggtattgacctcccggctgattgaccgggca
ttgcgtcctctgttccccgatgattatttatgcgaggtgcaggtgctggtaacgctgatc
agcagtgatcctgaaatattgccggatgctatggcctgcctggctgcatctgctgctttg
gcagtgtctgatgtgcctattaaagaaattatcagcgaagtgcggattggccgcgtgaac
ggacagtttaaaataaatcccacccgttctgaaatggaaaactctgatatggactttatc
attgcggctactgaaaagaacctgatgatggtagagggagagtctgaagagtgcagcgag
gatgacctggtggcagcattgggtgtggcgcatgaagccatccgtgttcagattaaggcg
caggaagaactacgtgcgcttaaaggtgtttccggaaaaagggaatacaccaaaccagcc
caggatgaagcgttacgtgaaaaagtgtacggctttgcacagtcaaaagtgtatgaagtg
gctaaaggaaagctgggcaaacatgaacgtactgaccgctttgaagctattgaggaagaa
atgctgaaaagctttgaagaagccgccaccgaagaagctccttttaccgatgaacaaaag
aaaatggcgaaaaactattttcatgacctgcagtatgacgtggtaagagacatgatcctg
aatgagcgcataagactggacggccgctctttaacagagatcaggccgctggatatggaa
gtggatgttttaccttctccccacggatcagcattatttacacgtggtgaaacacaatca
ttaactactgttaccttaggtacagctttagatgaattactggtggaatcagctgccaaa
tcagaatattccaaatttattctgcattataattttcctccgttctcaaccggcgaagtg
aaaatgatgcggggccccggccgtagagaagtaggacatggcaacctggccatgcggtct
ttgaaacaaatgatgccggacagcggggatgattttggttatacggttcgcgtggtgagc
gatattctggaatcgaatggttcatcttctatggctactgtttgcgccggctctcttgcg
ttaatggacgcgggtgtgcccattccaaagcatgtatccggaattgctatgggattgatt
accaaagaagaaaagttcgctattttaagtgatattttaggcgatgaggatcacctgggc
gatatggactttaaagttaccggtacccgtgatggtatttgcggtgtacaaatggacata
aaggtagacggccttcctatggaagtaatgaagcaggccctggagcaggcaaaagccggc
cgtctgcatattctggaagccatgtataaaacaattccggaagcacgtgctgaggtaaaa
ccgcatgcaccacgtgttgtgaaaatgtttatcgacaaagaatttattggtgctgtgata
gggcctggtggtaaagtgatccaggaaatgcaacgggaaaccggaaccaccattaatatt
gaagaagtcaataacaggggtgagatcagcatttttggtattgagaagactgctgttgaa
aaggcagaaaactggatcaaaggtattgttgccgttcctgttgtaggtgaagtatatgat
gccgttgtgaaaggtattaaggaatttggagcttttgtggaattcctgcccggcaaacag
ggcctggtacatatcagtgaaatcagctggaagcgcctggaaaccctggatggggtagta
aaagaaggtgattctatgaaagtaaagctgatcggtacagatcctaaatccggcaagttt
aaattgtcgcgcaaggcactgattccccgcccggagaaaaaagagaacaagggggaagca
tccagcccggcatccggaaataattga
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