Niabella ginsenosidivorans: A8C56_11970
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Entry
A8C56_11970 CDS
T04418
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nia
Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nia03400
]
A8C56_11970
DNA repair and recombination proteins [BR:
nia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A8C56_11970
Archaeal homologous recombinant proteins
A8C56_11970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
nSTAND3
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ANH81596
UniProt:
A0A1A9I1U2
LinkDB
All DBs
Position
complement(2877618..2881349)
Genome browser
AA seq
1243 aa
AA seq
DB search
MRIFAIRIKNLASLDGVTEIDFTREPLSSAGIFAITGPTGAGKSTILDALCLALYAKTPR
YRMAESGIEIKDVQGSTIHQGDVRGILRDGTADGYAEVDFAGIDGQHYRATWTVRRAYNK
AEGSLQAFGITLKNMSTHTNVPGKKTELLEEIERLVGLNFEQFTRSVLLAQGDFTAFLKA
GRDEKSALLEKLTGTSIYSEISKRIFENHREQQQKLRELRLRREGIATLTMEELDALQEQ
RIALTAIIKAGDQQLADLSKEINWHEQRVKFQEGVETARLAYDQANRNKEAAAPREQHLQ
VVDRIQPVRPLINNLQNVQEQLESKSKQLAELNDRLSTLQQQKQILDVAIEKAINDLGTK
IKEEEDAQPLLDEAKALDVQLSEKAEQIKQAAEENEQIHSRQKELSGQLLQAQKESDLLE
QEVTKLTQWKIDHEARRPVAEQERMILSKLGDAESVLESLHHYALRIHNAEQETAAYQQQ
AQQLEKEKETVRKSLQQLQQGYNAFQTALLKIPIQDIEAEKAATDTLVGDIISATAHWRL
LYTAIKEKEARQQSLTQHQKELGEQTEKLTAAERLLEIKKAERDVSLKSLEKARLIAAGS
IEKLRSQLEPGEPCPVCGSTEHPYALHDPSLGQVLAGLEVSYRQAESGYAQQLAAHSSLN
QACIQIRKNISVYEASVADKTKTIEELTHKWTEFGISKRCVNLPVEETGNWLQQQLQLQK
EKQQQLQQQIQSYGKQKDNLEVHKTKLTALEKRFNDAENDSKDIGRALKSLQEQKAHDEG
ERQKAESKLDKLKETLSGYFTSEKWFQNWQSNPETFAKHITEFALEWKTSMERLEENIRK
QHVLVEKLKGIRKQADTIREEVALKEQKLSSLQLQRNGLSERRKTIFNGAPVTGIETGLK
NAVSSARQLAEQKKKEAELVQGNITRNTAQSEQLEKDSTFLSKQETELKEKLGEWLNNHN
QQYETTLTETELLPLLAFTRDWIEKERTGLRAIDDAVMQARSVFEERVKALENHTAQRLS
ERTLEALIALQTEAQATWKQNNQTANEIDFKIKDDEVNKQRIGQLLENIERQSQVVDNWA
KLNEMIGSADGKKFRQVAQEYTLDVLLSYANVHLEMLSRRYVLQRIPNSLGLQVLDQDMG
NEVRTVYSLSGGESFLVSLALALGLASLSSNRMKVESLFIDEGFGSLDPATLNIAMDALE
RLHNQGRKVGVISHVQEMTERVPVQIRVSKRQSGKSKVEVVGM
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgagaatatttgcaatacggatcaaaaatctggcttctctggatggcgttacagagatc
gattttacccgggagcccctttcttctgccggtatatttgccataaccgggcctacaggc
gcaggtaagtcaacgatcctggacgcgctttgcctggccttatatgccaaaacgccccgg
tacaggatggccgaaagcggtatcgagatcaaagatgtgcagggtagcacgatccatcag
ggagatgtacggggcatactgcgcgatggcactgcagacgggtatgcagaagtggatttt
gcaggtattgacgggcagcattacagggcaacctggacggtgaggcgggcttataacaag
gcagaaggaagcctgcaggcttttggtattacccttaagaatatgagcacccatacaaat
gttccgggtaagaaaacagagctgctggaagagatagaacggttggtgggactgaatttt
gaacagttcacccgctcggtattgctggcccagggcgattttacagctttcctgaaagca
ggcagggacgaaaaatcggctttactggaaaagcttaccggtacatctatttattcggaa
atttcaaaacggatttttgaaaatcaccgggagcagcagcaaaaactacgggagctgcgc
ctgcggcgggagggcattgctacccttactatggaagaattagatgccttacaggaacag
agaattgcattgacggctataataaaagcaggtgatcagcaattggctgatttaagtaaa
gaaatcaactggcatgaacaacgggtgaaatttcaggaaggggttgaaactgcccggctg
gcctatgaccaggcaaaccggaacaaagaagccgcagcgccacgtgagcaacatttacag
gttgttgaccgtattcagccggtaagaccgcttatcaataacctgcaaaatgtgcaggaa
caactggaatcgaaatcgaagcaattagcggagctgaacgaccggttatccaccttgcag
cagcaaaaacaaatactggatgttgcaatagaaaaggcaatcaatgatctgggcacaaaa
ataaaagaagaagaggacgcacaaccgctgctcgatgaggcaaaagcactggatgtacaa
ttatctgaaaaagcggaacagataaaacaggctgctgaggaaaatgagcagatacattcc
aggcagaaagagctgtcaggccaattgttgcaggctcaaaaagagtcggatttattagaa
caggaggttacaaaacttactcagtggaagattgatcatgaagcccgccggccggttgca
gaacaggaacgcatgatcctgtctaaactgggagatgctgaaagcgtactggaaagtttg
catcattacgccctgcgcattcataatgcggagcaggaaacagcagcttatcaacagcag
gcgcagcaactggagaaagaaaaggaaactgtccggaaatcgttacaacagttgcagcag
ggttacaatgcatttcaaactgctttattaaagatcccgatacaggatattgaagcagag
aaggctgcaacagatacattagtaggagatattatttcagcgaccgctcactggcgactc
ttatacactgctataaaagaaaaagaggcacgccaacagtcattaacacaacatcaaaaa
gaacttggggagcaaacagaaaagctgacagcggctgaaaggctgcttgagatcaagaaa
gcagaaagggacgtttccctgaaatcactggaaaaagccagactaattgctgccgggagt
atagaaaagctccggagtcagcttgagcctggagaaccctgtccggtctgcggaagtaca
gaacatccctatgcattgcatgatccctcgcttgggcaggtgcttgccgggctggaagtc
agctatcggcaggctgaatcaggatatgcacagcagttggctgctcatagcagcttaaac
caggcttgcattcagataagaaaaaacatatccgtatatgaagcaagtgttgcagacaag
acaaaaaccattgaggaattaacgcacaaatggactgaattcggtatcagcaaaagatgc
gtgaatctgcctgttgaagaaaccggtaactggctgcagcaacaattacagctgcaaaaa
gaaaagcagcagcaattgcagcaacagattcagtcttatggcaaacaaaaagacaactta
gaagttcataaaacaaagctgactgcgctggagaaacgattcaatgatgctgaaaatgat
tcgaaggatattggcagagcgctgaaatctttacaggaacaaaaggcacatgatgaaggc
gaacgacaaaaagcggaaagtaagctggataagctaaaagaaacattatcaggttacttc
acatcagaaaaatggtttcaaaactggcagagcaatccggaaacgtttgcaaagcacatt
acggagtttgcccttgaatggaaaaccagtatggaaaggctggaggagaatatccggaag
caacatgtattagtggagaagctgaaagggatacggaagcaggcggatactataagggaa
gaagtagcgctgaaagagcaaaagttatcatcgttacagcttcagaggaacggtttatct
gagcggaggaaaactatattcaacggagcgcctgtaaccggtattgaaacaggtttaaag
aatgctgtttcttcagcaaggcagttagcggaacaaaaaaagaaagaggcagaactggta
cagggcaatatcacccggaatacggctcaaagcgaacagctggaaaaggacagtacattc
ctgtcaaaacaggaaacagagttaaaagaaaaacttggtgagtggctgaataaccacaat
caacagtatgaaactacgttgacagaaacggaattgttaccattattagcttttacccgg
gattggatagaaaaagaacggacaggcctgcgcgccatagatgatgcggtgatgcaggcc
cggtcagtttttgaggaacgggtaaaagccctggaaaatcatacagcccaacgtctctcg
gagagaacattggaagcattgatcgcattgcaaacggaagctcaggcaacatggaagcaa
aataatcaaactgctaatgaaattgattttaaaataaaagatgatgaagtcaataagcaa
cggatcggtcagctcctggagaacattgagcggcagtcacaggtagtagacaactgggca
aagctcaatgaaatgatcggttctgctgatggaaaaaaattccggcaggttgcgcaggaa
tatacactggatgtattactgagctatgcaaatgtgcacctggagatgcttagcaggcgt
tatgtattacagcggatccccaactcgctgggcctgcaggtgcttgaccaggatatgggc
aatgaagtgcgcacggtatattccctttccggtggcgaatccttcctggtatcgttggcg
ctggcactgggcctggcctcgctttcatccaatcgtatgaaggtagaatccctgttcatt
gatgaaggttttggttcgctcgatcctgcaacgctgaacattgcgatggatgctcttgag
cggctgcacaaccaggggcgcaaggtgggtgtgatttctcatgtgcaggaaatgacagag
cgggtacctgtacagatcagggtaagtaagcggcagagcggaaagagtaaggtagaagta
gtggggatgtaa
DBGET
integrated database retrieval system
