Niabella ginsenosidivorans: A8C56_12055
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Entry
A8C56_12055 CDS
T04418
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
nia
Niabella ginsenosidivorans
Pathway
nia03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
A8C56_12055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nia03400
]
A8C56_12055
DNA repair and recombination proteins [BR:
nia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
A8C56_12055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ANH81612
UniProt:
A0A1A9I4J8
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All DBs
Position
2897208..2897987
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AA seq
259 aa
AA seq
DB search
MKAIWTGAIGFGLVNIPVKLYTATEESSLDLDMLDKKDLSNIRFKRVNEHTGKEVAWENI
VKGYNYDGKYIVLNEEDFEKASPEKSQLLSIDQFVKMEEIDSIYFETPYYIEPQKGGEAA
YNLLREALKKTGMAGLGTFVMRGREVLGILRPFNELLLFQRMRYSQEIRNTDELKIPKGS
VKPAELKMAVALIAQLEQPFDISAYKDDYTAALMKIIQSKAKGKKTAAPSKMHVAYSKTR
DLMEQLKASLSASKGKKIS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctatatggacaggagcaatcgggtttgggcttgtaaacatccctgtaaaactg
tacacggctacggaagaaagcagcctggacctggatatgctggataaaaaggacctgagc
aatatccggtttaaaagggtgaacgaacataccgggaaggaagtagcctgggaaaatatt
gtgaaaggctataattacgacggcaaatatattgtgctgaatgaagaggacttcgaaaag
gcaagcccggaaaaatcgcagctgttgtctattgaccagtttgtaaagatggaagagatc
gacagcatctattttgaaaccccttattatatagagccgcaaaaaggaggagaagcggcc
tataacctgctgcgggaggcgctgaaaaagacgggcatggccggtttgggcacatttgtg
atgcgtggcagggaggtgttaggcatcctccgtcctttcaatgagttgttgctctttcag
cggatgaggtacagccaggagatccggaacacggatgaactgaagatccccaaaggatcc
gtaaagcctgccgaactgaaaatggcggtagcattaattgcccagcttgagcagccgttt
gacatcagtgcctataaagacgattatacggctgccctgatgaagatcattcagtcaaaa
gcaaagggcaaaaaaacagcagccccgtcaaaaatgcatgtggcttacagtaaaacccgg
gatctgatggagcagttaaaagcaagtttgtccgcatcaaaaggtaaaaaaatctcctga
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