Niabella ginsenosidivorans: A8C56_13965
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Entry
A8C56_13965 CDS
T04418
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
nia
Niabella ginsenosidivorans
Pathway
nia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A8C56_13965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nia03400
]
A8C56_13965
DNA repair and recombination proteins [BR:
nia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
A8C56_13965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
ANH83938
UniProt:
A0A1A9I8D5
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Position
complement(3358457..3360565)
Genome browser
AA seq
702 aa
AA seq
DB search
MKLYPESAYIQLEFDKIRDLLKKYCETDYAQRKAAELRIHTQKRFIDAELRQSYEFKQLI
QNAIHFPNDYVLNLAKELKLLSIPGALLTGEQLLQVRKLAESIEKIFRWFDAERKLAYEG
LHAVIKDTYYEKAIIALIDEVIDEIGQVKDSASPELKEIRMSLYRKRNELRRIFDKIVAK
LNKQGYLAEIEESFMNGRRVIAVFAEQKRAVRGILHGESDSRKTAFIEPEETMHLNNEVS
GLEHEERKEIDRILRQLTAKLSAHAGLLATYHAVIGEYDFIRAKAKFALDVHGAFPVVQD
KAQVHLVNAYHPLLYLYNKRAQKQTYPVSITLNENQRILVVSGPNAGGKTVTMKTVGLLQ
MMVQSGLLVPVHPDSEFGIFKQLMIHIGDTQSLEFELSTYSSHLIHMKYFMEHANGKTLF
FIDELGSGSDPNLGGAFAEVILLELLKKHSYGIVTTHYLNLKVMAGKTHGIVNGAMAFDE
RNLLPLFQLVVGRPGSSYTFSIAERIGLDKRLINQARQMVNDDQYRLDKLLNRTEQDLRD
LAKKDRELERLIKENERLKKEMERVMDKEKHRQQMNVLREQNKISEERIAYLKDMERKLK
QITIEWKKEEDKQKLIKQINNLLFNRNEKKAVSKIQKKIDSKYQEIGGEIKTGDKVKMKR
NHQVGEVLEIKGRRAVVKIGLLPMQVELNDLVVVKEKEATAG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatcctgaatcggcttatatacaactggagtttgacaagatcagagacctg
ctcaaaaagtattgcgagacggattatgcccagcgcaaggcagccgagctgcgcatacat
acacaaaagcggtttattgatgcggagctgaggcaatcctatgagtttaagcagctcatc
cagaatgctattcattttccgaatgattatgtgctgaatcttgcaaaggaattaaaatta
ttatctatccccggtgctttattgaccggagagcaattgctacaggtaaggaagctggcg
gaaagtattgaaaagatcttccgctggtttgatgccgagcgcaagctggcctatgaaggg
ctgcatgctgttataaaggatacttattatgaaaaggccatcatcgctttgattgatgag
gtgattgatgagattggccaggtaaaggacagtgcctcaccggaattgaaggagatccgc
atgagcctttaccgcaagcggaatgaattacgcagaatctttgacaagattgtagctaag
ctgaataagcaggggtacctggcagagatcgaagaaagctttatgaacggccgccgggta
attgccgtgtttgcagaacaaaaacgtgcagtaagaggtattttgcatggagaaagcgat
agtcgtaaaacggcttttattgaaccggaagaaaccatgcacctgaataatgaagtaagc
ggcctggaacatgaggagcggaaagagatcgaccgtatcctcaggcagctgaccgcaaaa
ctatctgctcacgccggtttgctggctacctatcatgctgttatcggggagtatgatttt
atccgtgccaaggcaaaatttgccctggatgttcatggagcttttcctgtggtgcaggat
aaggcccaggtgcacctggtaaatgcctatcacccgctgctttatttatacaacaaacgg
gcacaaaaacaaacctacccggtttcaataacgctgaatgaaaaccagcggatattagtg
gtaagcgggcccaatgcaggcggtaaaacagtgacgatgaaaacggttggcctgctgcag
atgatggtacagagcggactgctggtaccggtgcatccggatagtgaatttggtattttt
aaacagctgatgatccacattggcgatacgcaaagcctggaatttgagctgagcacctat
agcagccacctgatccacatgaaatattttatggagcatgccaatggtaaaacactgttc
tttattgatgaactgggcagcggaagcgatcctaacctgggcggtgcatttgctgaagtt
attttgctggagctgttgaaaaagcattcttacgggatcgtaaccacgcattacctgaac
ctgaaagtgatggcgggcaaaacacatggtattgtaaacggagcaatggcttttgatgaa
aggaacttgctgccgttgttccagctggtggtgggaagacccggcagctcttataccttt
tcgatcgctgagcgtattggcctggacaaacgtttaattaaccaggcacggcaaatggtg
aacgatgatcagtaccgcctggataaattattgaaccggacagaacaggatctgcgggat
ctggctaaaaaagacagagaactggaacggttgataaaggaaaatgaacgcctgaaaaaa
gagatggaacgggtgatggataaggaaaagcaccgccagcaaatgaacgtgctgcgtgag
cagaataaaatatcagaggagcggatcgcctatctgaaggatatggagcgcaagctgaaa
cagattactattgaatggaaaaaagaggaagacaaacaaaagctcatcaaacagatcaat
aaccttttgtttaaccgtaatgagaaaaaagcggtcagtaagatccagaaaaaaatagac
tccaagtatcaggagattggcggtgaaataaaaacaggcgataaagtaaaaatgaagcgc
aatcaccaggtaggcgaagtgctggaaataaaaggcaggcgtgccgtggtaaagatcggt
ttgctgcccatgcaggtggagctgaacgaccttgtggtggtaaaggaaaaagaagccacg
gcaggatag
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