Niabella ginsenosidivorans: A8C56_14300
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Entry
A8C56_14300 CDS
T04418
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nia
Niabella ginsenosidivorans
Pathway
nia03030
DNA replication
nia03430
Mismatch repair
nia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A8C56_14300
03430 Mismatch repair
A8C56_14300
03440 Homologous recombination
A8C56_14300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nia03032
]
A8C56_14300
03400 DNA repair and recombination proteins [BR:
nia03400
]
A8C56_14300
Enzymes [BR:
nia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A8C56_14300
DNA replication proteins [BR:
nia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A8C56_14300
DNA repair and recombination proteins [BR:
nia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A8C56_14300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RecG_wedge
Cytochrom_C_2
PHP_C
Motif
Other DBs
NCBI-ProteinID:
ANH81985
UniProt:
A0A1A9I3U2
LinkDB
All DBs
Position
3432111..3435782
Genome browser
AA seq
1223 aa
AA seq
DB search
MKFSHLHVHTQYSLLDGAAPISSLYKKAIADGMPALAISDHGNMFGVFQFVAEAYKHLDE
NGKPKVKPVVGCEFYIVENRHEKTFTKEKKDRRYHQILLAKNETGYKNLVKLTSLGFIEG
LYGKYPRIDKELILQYHEGLIATTCCLGASVPQAILRKGETEGEQEFKWWLDLFGEDFYV
ELQRHGIGDQDKVNQVLLKWAAKYNVPIIASNDSHYVEQDDFNAHDILLCINTGEKQSTP
AFRGDFADDDVNMKNMRFAFANDQFYFKNTEEMSKLFQDIPAAIDNTNAIVDKIELLDLK
RNILLPNFPIPDDYKKYTEDEKTDKGIVSADSLNQWEYLRHLTYEGAQKKYGVITDEVKE
RLDFELFTIKTMGFAGYFLIVSDFIKAGRDNGVFIGPGRGSAAGSVVAYCIGITNIDPIK
YDLLFERFLNPDRKSMPDIDTDFDDEGRQKVIDYVVQKYGKNQVAQIITYGTMAAKMSIK
DVARVMDLPLAESNALAKLVPEKPGISLKRVLHAPIQPKAGEKSLIEKEGLGADDIENVK
KIREIYNGSDLQSKVLHEAEILEGSVRNTGIHAAGIIIAPKDLTELLPVSTAKDSDLWVT
QIEGSVIEEAGVIKMDFLGLKTLTIIKDALKLIKQNHGIDIDIDSIPLDDEKTYELYQKG
ETNATFQFESAGMQKYLRELKPDRFGDLIAMNALYRPGPMAYIPQYVDRKHGREEVTYDL
PEMEEYLKDTYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKQKAVLDKMKKQFVEG
AAKKGHPAEILEKIWTDWEAFAQYAFNKSHSTCYAFVAYQTAYLKAHYPSEYMAGVLNNA
GSLEKITFFMEECKRMGLPVLGPDINESQKGFAVNKKGEIRFGLGGLKGVGEAAVESLIK
EREENGNYTSIFDMIKRVNQRTVNKKTLESLAYAGAFDCFKDLHRAQYFYVPQGDTTNGL
EKIIKYGQICSAQAQTSTNTLFGDLAEVMEVQVPKIPDCAPWPLVVQLDYEKQVTGIFIS
GHPLDDYRFEMEHYGISKIAFLNDYRNGEKEKISSAVSFKIMGLVSDAQHRISRSGNKFG
SFIIEDYSGKLDLVLFSEDYMKYAPMLQLGATVYITGYFKQRFNGEYDFKIASLCLAESV
IKNQTKKLTIELPVEEITKETVQFIQTNIKTHKGPSMLKLSIKDKTEDIQVDLMTQGKGF
EMNTELIEYLSKQINWNVAVELN
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcccatttacacgttcatacccaatattctttgctggatggagctgccccc
atcagttccctgtataaaaaagctattgcagacggaatgccggcgctggctatcagtgat
catggtaatatgtttggtgtcttccagtttgtggcagaagcgtataagcacctggatgaa
aatggcaagccaaaagtaaaaccggtggtgggctgtgagttttacattgtagagaaccgc
catgaaaaaacatttaccaaagaaaaaaaagacaggcgttatcaccagatactcctggcc
aaaaacgaaaccggctacaaaaacctggttaagcttacctccctgggttttattgaagga
ctgtatggaaaatatccccgtattgacaaggaactgatcctgcaatatcatgaagggctg
attgcaaccacctgctgcctgggagcctccgttccgcaggccatcctgcgtaaaggagaa
acggaaggtgaacaggagtttaaatggtggctggatcttttcggggaagacttttatgta
gaactgcagcggcatggcattggcgatcaggataaagtaaaccaggtgctgctgaaatgg
gccgccaaatacaatgtgcccatcatcgccagtaacgattcccattacgtagagcaggat
gattttaatgcgcacgatatcctgctctgtatcaataccggcgaaaagcaatcgacccca
gccttccggggcgattttgcagatgatgacgtgaacatgaaaaacatgcggttcgctttt
gcaaacgaccagttctactttaagaatacggaagaaatgagcaaattgttccaggacatc
ccggcagcaattgataatacaaacgctattgtagataagatcgaattactggacttaaag
cgcaacatcctgctgcccaactttcccattccggacgattacaaaaaatatacggaggac
gaaaaaacggataaaggtattgtttctgccgattccctgaaccaatgggaatatctgcgg
catctgacttatgaaggcgcacagaaaaaatacggggtcattaccgatgaagtaaaagaa
cggctggattttgaattattcaccattaaaacaatgggctttgcaggttatttccttatt
gtaagcgactttataaaagcgggaagggataatggcgtgtttattggccccgggcgtggc
tccgctgcaggttctgtagtagcttattgtattggcattacgaatatagacccgataaaa
tacgacctgctgtttgaacgcttcctgaacccggaccgtaaatccatgccggatattgat
acggattttgatgatgaaggccgccagaaagtgatagactatgtggtacagaaatatggt
aagaaccaggtagcccagatcattacgtatggcaccatggccgccaaaatgagtattaaa
gacgtagcgcgcgtaatggatcttcccctggcagaatcaaacgccctggcaaaactggtt
ccggaaaaaccaggcatttcccttaaacgggtgctgcacgcccccattcagccaaaggcc
ggggaaaaatcgcttatagaaaaagaagggttaggtgcagacgatattgaaaatgtaaaa
aagatccgcgaaatatataatggcagcgacctgcaaagtaaagtattgcatgaggctgag
atcctggaaggttccgtaaggaataccggcatccacgccgcagggattattattgctccc
aaagatctcacagagctgctgccggtaagcactgcaaaagattcagacctgtgggtaacg
cagatcgagggtagtgtgattgaagaagcaggtgttatcaaaatggacttcctgggctta
aaaacgctcaccattattaaggatgcattaaaactcataaaacagaaccatggtattgat
attgatattgacagcataccgctggacgatgaaaaaacttacgagctttaccagaaagga
gaaaccaatgccactttccagtttgaaagtgccggaatgcagaaatacctgcgcgagctg
aagcccgaccgttttggcgacctgattgctatgaacgccctgtaccgccccggccctatg
gcttatattccgcaatacgttgatcgtaaacatggccgcgaagaagttacttatgatctt
cctgaaatggaagaatatctgaaagatacctatggtattactgtataccaggaacaggtg
atgctgctgagccagaaacttgccggatttagtaaaggagatgcagatgtattgcgcaag
gcaatggggaaaaagcagaaagccgtactggacaaaatgaaaaagcaatttgtggaagga
gccgcaaaaaagggccatcccgcagaaatcctggaaaagatatggaccgactgggaagct
tttgcccaatatgcattcaataaatcgcactccacctgttatgcctttgtagcttatcaa
accgcttatttaaaggcgcactatcccagcgagtacatggccggggtgctgaacaacgcc
ggttcgctggaaaagatcactttctttatggaagaatgtaaacgcatgggattgcctgta
ctggggccggatattaatgaatcgcaaaaaggttttgcggtaaataaaaaaggagaaatc
cgctttgggttaggaggcctaaaaggcgtaggtgaagctgcggtggaaagcctgatcaaa
gaaagagaagaaaacgggaattatacatccatctttgacatgatcaagcgggtgaaccag
cgtaccgtaaataagaaaaccctggaaagcctggcgtatgcaggtgcctttgattgtttt
aaagacctgcatcgtgcacagtatttttatgtaccgcagggagatactaccaacggactg
gaaaaaattataaaatacgggcagatctgctctgcccaggcgcaaacaagcaccaatacg
ctttttggcgacctggcggaagttatggaggtgcaggtaccgaagattcctgactgtgcc
ccctggccgctggtggtgcagttagactatgagaagcaggtaacaggaatcttcatcagc
gggcatcccctggacgattaccggtttgaaatggagcactatggcatctccaaaattgct
ttcctgaacgattacaggaacggggaaaaagaaaaaataagctctgctgtcagcttcaag
attatggggctggtatcggatgcacagcaccgtatttcccggtccggtaataaattcggc
agcttcatcattgaagattacagcggaaagctggacctggtgctgttttcagaagattat
atgaaatatgcgcctatgctgcagctgggtgccaccgtttacataaccggttatttcaaa
caacggttcaatggtgaatacgacttcaaaatagcttcattatgccttgcggaaagcgtt
atcaaaaatcaaacaaagaaattgactattgagctgccggtggaagagatcacaaaagaa
acggtccagtttattcaaacaaatattaaaacgcataaaggtcccagcatgctgaaactt
tctattaaggataaaacggaagatatacaggtagatcttatgacacagggaaaagggttt
gaaatgaacacggagctgatcgaatacctctccaaacaaattaactggaatgtagcagta
gaactgaactga
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