Niabella ginsenosidivorans: A8C56_15640
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Entry
A8C56_15640 CDS
T04418
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
nia
Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nia01002
]
A8C56_15640
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nia01011
]
A8C56_15640
Peptidases and inhibitors [BR:
nia01002
]
Cysteine peptidases
Family C82
A8C56_15640
Peptidoglycan biosynthesis and degradation proteins [BR:
nia01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
A8C56_15640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Vps23_core
Motif
Other DBs
NCBI-ProteinID:
ANH82205
UniProt:
A0A1A9I4G2
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All DBs
Position
3722064..3723839
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AA seq
591 aa
AA seq
DB search
MPVRRVLTAVLVLTIIAAVSCKNEDKKAKKKVIRVEKPVTKVDVTIDTTNAFNQLFIDSS
LVNSYLAKDSLSDTLINRIKSFYNSRNYQYAWFSPEGLPEHTVSFWNMLKNYLNYSKDST
VYNKALALKMESIINTDKLKIRNDSTYQALELALTKYFYLYADHAYADDPGFDMKTLEWY
IPKKKLTLEGMLDSVLAGKGQFSNAYAPTNPQYKQLREQLQKYKTIKDAGGWPRVNSPVE
VMRIGFKDPSVKTLKKRLKIEGFLEGEDSTFTNTYNASLAEAVNAIKRAYGYKEDGTAGK
TFLKDVNVSVDERIQQILINMERMRWIPIETKDSGRAIMVNIPEYKMHVYENGRPAWDMN
VVVGKESNNTTVFTGVLKTVVFSPYWNVPTSIVKKEMGGRPSQAYLERNHMEIVNGQVRQ
KPGPWNSLGLVKFLFPNSYNIYFHDSPAKSLFNRDKRSFSHGCIRLKEPAKFAEYVLEDT
ARWSEQKVDSAMHSYKEKYVRVKRPIPVLITYFTAWVDDDGALNFREDIYGHDAVIAKKM
FLNSVGTTYSRQKAIRDSLQHIKDSIKAKELELKQKRKADSLKQAKVMSGG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttcgacgtgttctgactgcagttctggtattgactatcattgccgctgtttcc
tgtaaaaatgaagacaaaaaagcaaagaaaaaggttatacgggttgaaaaaccggttaca
aaagtggacgttaccattgacaccactaacgcctttaaccagctatttattgacagttct
ttggttaacagttatttagctaaagatagcctgagcgatacattgataaacaggatcaaa
agcttttataacagccgtaactaccagtatgcctggttctctccggaaggacttccggag
cataccgtttccttctggaatatgctgaagaattacctgaattattcaaaggattccaca
gtgtataataaagcgctggcccttaaaatggaatcgatcatcaatacagacaaactgaag
atccggaatgattccacctaccaggcccttgagcttgcgctgacgaaatatttttatctg
tacgcagatcatgcctatgctgatgatcctggttttgatatgaaaaccctggaatggtat
attcccaaaaagaagctgacgttagaaggaatgctggattcggtacttgcgggaaagggg
cagttctccaacgcctatgctcctaccaatccgcaatacaaacaactaagggagcaactg
cagaaatacaaaaccataaaagatgcaggcgggtggcccagggtaaacagccccgttgaa
gtaatgaggatcggcttcaaagatccctccgtaaaaacattaaaaaaacgattgaaaatt
gaaggattcctggaaggagaagacagtacctttaccaatacctataacgcctctctggca
gaagctgtaaatgctataaaaagagcctatggctataaagaggatggcacagccggtaaa
accttcttaaaagatgtgaacgtttctgtagacgagcgcattcagcagatactgatcaat
atggagcggatgcgctggatccccattgaaaccaaggattccggccgcgctatcatggtc
aatattcctgaatataaaatgcacgtttatgaaaacgggcgcccggcatgggatatgaat
gtggtggtgggtaaagaaagcaataataccacggtgtttacaggcgttctgaaaacagtg
gttttcagcccttactggaacgtgcctaccagcattgttaaaaaagaaatgggcggacgc
cccagccaggcttacctggaaaggaaccatatggaaatcgtaaacgggcaggtacgtcag
aaaccgggcccctggaattccttagggctggtaaagttcctgtttcccaacagctataac
atctatttccatgactcacctgccaaaagcctgttcaacagggataagcgcagtttcagc
catggctgcatccgcctgaaggagccggcaaaatttgcagaatatgtactggaagacaca
gcccgctggagcgagcagaaagttgactcggccatgcacagctataaagaaaaatatgta
cgtgtaaaaaggcccataccggtactgatcacctattttactgcctgggtagatgatgat
ggtgccctcaatttccgggaagacatttacgggcatgatgccgtaattgctaaaaagatg
ttcctgaacagcgtgggcactacctatagccgtcaaaaggccatcagggacagcctgcaa
cacataaaagattccattaaagcaaaggaactggagctgaagcagaaaagaaaggcagac
agcctgaagcaggcgaaagtgatgagtggtgggtag
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