Niabella ginsenosidivorans: A8C56_15795
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Entry
A8C56_15795 CDS
T04418
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
nia
Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nia02000
]
A8C56_15795
Transporters [BR:
nia02000
]
Other transporters
Pores ion channels [TC:
1
]
A8C56_15795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
TonB_dep_Rec_b-barrel
TTR_TEN1-4
Big_1
Motif
Other DBs
NCBI-ProteinID:
ANH82230
UniProt:
A0A1A9I695
LinkDB
All DBs
Position
complement(3773907..3777044)
Genome browser
AA seq
1045 aa
AA seq
DB search
MIVILPKARNCFLRVCILFLLQCLGFTGLYAQVTQVKGLVLNAKGTPLSGVSVILKGTST
GTTTDSMGHFSLQVKGTSAVLTFSAVGYIEKEEPVNGRATMDVTLSESVSDLDDVVVIGY
GTQKKRDVTGAISSITSKNIEERQPVNLFDALQGQAAGVLVTNDGGGAPGAEGTIQIRGA
STLNSGNGPLYLVDGVITPDGASINPMDIDKIEVLKDAASAAIYGARAANGVIIITTKRG
KEGKARIDLNYSRIFGKLAHKLPQNNAAQVREFRRVQQKNPTGSTGGNIDSLNPGFNSDN
DLQELLLGNLGDRQQINLGVSGGQKGLNYYTGVNYLNDKSIIPNSYIKRVQVRSNIEYQA
SPKFKYVSNISMMYQTGNEIPIARTVAVAFDRPAYSLIYYPDGSLTSYVGSKRNPLANAL
LETNKTDRFSIQFSNSLQYRITKDLLFTNTFNAMLNNSQNLFFSPRYVSANKDQNNGSND
MQKTFSWEYQSFLNYNKTFGGAHNLQAVLGVSADKTRYDRAHSEYANVVSEEIFITQPSY
LTASQTYTDADLNAGASLFARANYSYKGKYTLAGIFRRDGSSRFGNESRYGNFYSASGGW
RFSDEPFMNWAKNVLTDGRFRIGTGQVGNDRIGSNDYLNKVTFTGGSYAGVGGAYTTPTF
GNARVHWETTIQQDAGLDLTFFRGRLTFTTDYYIKTTKDLLYQKDLPGETGFDNVMVNLG
TLENRGLEFSVKGTPILAKNSNRGVTWEIGGNISFEKSIIKKLGDGTPFIVANKWYIEEG
GKIGNFYGWKNLGVYQWNESNAYNDNWEPLTVVLGDDGKPLYENGLPVYTFNGQRYTGTV
HSMYDPGGKLRGGDVIWQNLNKDSLIDDRDRQILANAQPKFYLGILNNLTYRQFSLSFLV
NASFGSHVYNALLYAQSYPSNTGAGSPEMTYNVWRQPGDIAKYPYYPEYKNRGNEKKDAN
SLFIEDGSFIRLSSLRLSYMFSPGITRKVFLKGATVYVYGTNLLTWTNYRGYDPEFSASN
VLQPGYDNGKYPKRREYGFGINVNF
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaattttgcccaaagcacgtaactgctttttacgagtatgtatcctgtttctt
ttacaatgcctcgggtttacaggcttgtatgcccaggtaactcaggtaaaaggattggtt
ttgaatgccaaaggcacccccttgtccggagtctctgttatcctgaagggaaccagcacc
ggaaccacaactgactccatggggcatttctccctgcaggtaaagggaacatcagcagtg
ctcactttctctgcggtagggtatattgaaaaagaagaaccagtgaacggtcgcgccaca
atggatgttacgttatcagaatcagtttcagacctggatgatgtagtggttatcgggtac
ggaacacagaaaaagcgggatgttacaggcgccatttcctctatcacttctaaaaatatt
gaagagcggcagcccgtcaatttatttgatgcattgcaggggcaggccgcgggtgttttg
gtaaccaatgatggtggtggcgcaccaggtgccgaaggtaccatccagatccgcggtgca
tcaacgcttaacagcggtaacggtcccttatatcttgttgacggtgtgattaccccggat
ggagccagcatcaatcccatggatattgataagattgaagttttaaaagatgcggcttcg
gcagccatttacggcgcacgggcagctaatggggttatcattattactactaaaagaggt
aaagaaggcaaggcgcggattgacctgaactattcccgcatttttggaaagcttgcgcac
aagctgccacagaacaatgcagcccaggttcgtgaattcaggagagtgcagcaaaaaaac
cctactggcagtaccggagggaatattgattcactgaaccccggttttaactcggataat
gacctgcaggaactgctgctgggtaaccttggagacaggcagcagatcaacctgggcgta
agtggcgggcaaaaagggctgaactattacaccggggtgaactaccttaatgataagtcg
atcataccaaacagctatataaaacgggtgcaggtaaggagcaatatagaataccaggct
tctcccaaatttaaatatgtgagtaatatttccatgatgtaccagaccggtaatgaaata
ccgatcgcaagaacggtagccgttgcatttgaccggccggcgtattcgctgatctattat
ccggatggttcactgaccagctatgttggttccaagcgcaacccattggcaaacgccctg
cttgaaaccaataaaacagaccggttctccatacaattcagcaattcattgcaataccgg
atcaccaaagacctgttatttacaaacacctttaacgctatgctgaataacagccagaac
ctgtttttctcaccgcgctatgtttcggccaataaagaccagaacaatggttccaatgat
atgcaaaaaacattttcgtgggagtaccagtcatttttgaattacaataaaacctttggc
ggtgcccataacttgcaggcagtactgggcgttagtgcagataaaacccgttacgacaga
gcgcactctgaatatgccaatgttgtcagtgaagaaatatttattacccagccttcctat
cttaccgcttcacaaacttatacggatgcagatctcaacgccggcgcaagtttatttgca
agagccaactatagttataaagggaagtatacacttgcaggtattttccgtagagacggt
tcttcgcgctttggtaatgaatccaggtacggtaacttctattccgcttcaggcggatgg
cgtttttccgatgagccgtttatgaactgggcaaaaaatgtattaacggatggccgcttc
aggatcggtaccggccaggtaggtaacgaccgcatcggttcaaacgattacctcaataag
gttacgtttaccggcggaagttatgcgggcgtgggaggcgcttataccacacctacattc
ggaaatgcacgggtacactgggaaaccaccattcagcaggatgccgggttggatctgacc
tttttccgcggcaggttaacctttacaacagactactatataaaaactacaaaggatctg
ctgtatcaaaaagaccttcccggagaaacgggttttgataatgtgatggtcaaccttggc
acactggagaaccgcgggcttgagttttctgtaaaaggtacgcccatcctcgcaaaaaac
agcaacaggggcgttacctgggaaataggaggaaatatttcttttgaaaagagcatcatt
aaaaagctgggcgatggcacgccgtttattgtggccaacaaatggtacattgaagaagga
ggaaaaatcggtaatttctatggctggaaaaaccttggcgtgtatcaatggaacgagtcc
aacgcctacaatgataactgggagccgcttacagtggtgttgggcgatgatggaaaaccc
ctgtatgaaaacggattaccggtatacaccttcaatgggcagcgttacaccggaaccgtg
cacagcatgtacgatccgggagggaaactgcgcggtggcgatgttatctggcagaatctg
aataaagacagcctgatagatgaccgcgaccggcagatactggccaatgcacagccgaaa
ttttacctgggtattctcaacaaccttacctaccggcaattctctttgtcgttcctggtc
aatgcctcttttggttcccatgtgtataatgcattgctgtatgcacaaagctatccctcc
aataccggcgccggaagcccggaaatgacttacaatgtatggaggcagcctggcgatata
gccaagtacccttattaccccgaatataaaaacaggggaaatgagaaaaaagatgccaac
agtttgttcattgaggatggctctttcatcaggctgtccagtctgcgcctttcttatatg
ttctcgccgggcattacccggaaagtattcctgaagggggcaacggtttatgtgtatggt
acgaacctgcttacctggaccaattacagggggtatgatcccgaattcagcgcatccaat
gtactgcagccgggttatgataatggcaagtaccctaaaaggcgggaatatggatttgga
atcaatgttaatttttaa
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