Niabella ginsenosidivorans: A8C56_16345
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Entry
A8C56_16345 CDS
T04418
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nia
Niabella ginsenosidivorans
Pathway
nia00260
Glycine, serine and threonine metabolism
nia00460
Cyanoamino acid metabolism
nia00630
Glyoxylate and dicarboxylate metabolism
nia00670
One carbon pool by folate
nia00680
Methane metabolism
nia01100
Metabolic pathways
nia01110
Biosynthesis of secondary metabolites
nia01120
Microbial metabolism in diverse environments
nia01200
Carbon metabolism
nia01230
Biosynthesis of amino acids
nia01240
Biosynthesis of cofactors
nia04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nia00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A8C56_16345 (glyA)
09102 Energy metabolism
00680 Methane metabolism
A8C56_16345 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A8C56_16345 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A8C56_16345 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A8C56_16345 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A8C56_16345 (glyA)
Enzymes [BR:
nia01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A8C56_16345 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ANH82321
UniProt:
A0A1A9I6J3
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All DBs
Position
complement(3895280..3896560)
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AA seq
426 aa
AA seq
DB search
MQQDNIVFNLINKELDRQRNGIELIASENFASLPVIKAMGTVLTNKYAEGYPGRRYYGGC
EVVDEIESLAIDRLKKIFNLSWANVQPHSGAQANAAVFFAVLNPGDKIMGLNLSMGGHLT
HGSPVNFSGKHYQVISYGVVKDTGLIDYDDLEAKALAEKPKMIICGASAYSRDWDYARIR
AVADKVGALVMADIAHPAGLIAAGLLNDPFEHCHIVTSTTHKTLRGPRGGIIMLRNDFEN
PWGYKDPKGNTRTMSQLLDLAVFPGIQGGPLEHIIAAKAVAFGEILSDDWKEYGKQIVAN
AQAMAKAFVDKGYKLISDGTDNHLMLIDLRNKNLTGKKAQETLDKAHITLNKNAVPFDDK
SPFVTSGIRVGVPAVTTRGMKEADVVHVVELIDKVLMNTDNEAVIASVKEGVRSFMQQFP
LYPELS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggataatatcgtttttaaccttattaacaaggaattagaccgccaacgtaat
ggcattgagctcattgcttcagaaaactttgcttccctgccggtaataaaagcaatggga
accgtattaaccaataaatatgctgaaggctaccccggcaggcgctattatggcggctgt
gaagtggtagatgaaatagagtcactggcgattgatcgtttaaaaaagatttttaatctt
agctgggccaatgtacagccccatagcggggcacaggctaatgctgctgttttctttgca
gtcctgaacccgggagataaaataatgggactgaacctgagcatgggcgggcacctgacg
cacggcagccccgtaaatttcagcgggaaacattaccaggtgatctcttacggagttgta
aaggatacgggcctgatagattatgacgacctggaagcgaaagcgctggcagaaaagccc
aaaatgatcatttgtggcgcatcggcttacagccgcgactgggattatgcgcgtatccgt
gccgtggctgataaagtaggcgccctggtaatggcagatattgcgcaccctgcgggactg
attgccgctggtttgctgaatgacccgtttgaacattgtcatattgttaccagtaccacc
cataaaaccctgcgcgggccaagaggcggcattattatgctgcggaatgactttgaaaat
ccctggggatataaagaccctaaaggaaatacccgtaccatgagccagttgctggacctg
gctgttttccccggtatacagggcggcccgctggagcatattattgcagcaaaagcggtt
gcttttggtgaaattttgtctgacgactggaaggagtatgggaagcaaattgttgccaac
gcacaggccatggccaaagcctttgtggataaaggatataaactcatcagcgatggaaca
gataaccacctgatgctgattgacctgcgcaataaaaaccttaccggcaaaaaagcccag
gaaacgctggacaaagcgcatattacgttaaacaaaaatgcggtgccttttgatgacaaa
tcgccgtttgtaacctccggtatccgtgtgggtgtgcccgcggttaccacccggggaatg
aaagaagccgatgtggtgcatgtggtggagctgattgataaagtgttaatgaatacagat
aatgaggccgtgatcgcatccgtaaaagaaggggtaagatcatttatgcaacaatttcca
ttatacccggaattatcttaa
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