KEGG   Niabella ginsenosidivorans: A8C56_20765
Entry
A8C56_20765       CDS       T04418                                 
Name
(GenBank) type II CRISPR RNA-guided endonuclease Cas9
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
nia  Niabella ginsenosidivorans
Brite
KEGG Orthology (KO) [BR:nia00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nia02048]
    A8C56_20765
Prokaryotic defense system [BR:nia02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    A8C56_20765
SSDB
Motif
Pfam: RuvC_III HNH_4 Cas9_a SAM_HAT_C
Other DBs
NCBI-ProteinID: ANH83088
UniProt: A0A1A9I5Z1
LinkDB
Position
complement(4934688..4938965)
AA seq 1425 aa
MRRNILGLDLGTTSIGFAKVIEDEDYQNSAVELIGVRVNPLTTDEQTNFEKGRPVSVNAD
RTLKRGMRRNLDRYQLRRHHLIEVLKANHIITVDTKLAEDGKNTTHATYAVRALAATAEI
PLEAFARVLLAINKKRGYKSSRKAKNEDEGQLIDGMAVAKRLYEENLTPGQLSYLLLKEG
KKYLPDFYRSDLNAELDKVWSFQKQFYPEILTEEFKKHLEGKGQRATSAAFWGQYGFNTA
ENKGSREEKKLKAYQWRSEAVDQQLTKEEVAYVITEINNDLNKSSGYLGAISDRSKELFF
NKQTVGQYLYQQLKQNPHTRLKGQVFYRQDYLDEFETIWETQAKFHPELTAALKEEIRDV
IIFYQRKLKSQKGLISFCEFESKEIEVEKNGLKIKKRIGLRVAPKSSPLFQEFKIWQVLN
NLEFRNKSSKEVFVPDMTAKQQLFDELNIKGNLLASEAIKILGYKTKDWEANYHTLEGNR
TNKSLYDAYLKILELEGYDEDLLKLSGSDDIDVSKIEKSASEIKQMVHAVFEVLGINSTI
LDFDAEADGKAFEQQTAYRLWHLLYSAEDDNKKYLQEDIFIYGHDNIGLKKKLCERFGFR
PEHTKILVNVAFSGDYGSLSSKAMRKIYPFIKELTYDKACREAGYRHSASSLSKEEIATR
PLQKRLGLLKKNELRSPVVEKILNQMVNVVNALIDDENKRRKARGLSDDFHFDEIRIELA
RELKKNAKERAEMTTNINAAKQLHEKIIKILQTQFGVSNPSRNDIIRYKLYEELKNNGYK
DLYTNTYISPDILFSKQIDIDHIIPQMSLFDDSFSNKTVVFRKDNQDKGNKTAYDYILGK
YGELALEEYISRITSLFELGKKNKEEGINKAKFQKLQKRLIDIGDGFIEKDLRESQYIAK
KAKNMLYAICRSVVATSGEITARLREDWDLVNVMQEINLPKFRALGLTEMVEKKDGGQKE
RIIDWTKRNDHRHHAMDALTIAFTRHSHIQYLNHLNARKDEASKWHPVVSKIEEKETDLV
YDDLGNRKRRFKAPMPNFREVVKEHLENVLISHKAKNKVVTKNKNKIKTAKGEKIKTELT
PRGQLHKETIYGRYRYYESKEEKVGPKFDAETIGMVVNPQYRKLLLERLTTNGNDPKKAF
GGKNTLSKNPLYIDEAKQELLPEKILLRWLNDDYSIRKDVTPENLKDVKTIEKVLDEGIK
KILLKRLVDFGNDPKKAFSDLDKNPIWLNEAKGITIKRVTISGVKNAEALHYKKDHFGNA
ILNENGKLIPSSFVSTGNNHHVAIYRDAEGNLQERVVSLFDAVQLVNAGEAVIDREYNKG
IGWQFLFTMKQNEMFVFPNEKTGFDPKEIDLLNTDNRKLISPNLFRVQKIASKNYFFRHH
LETNVEERKELKDIVYKPQLGLNAIKDVVKVRINHLGKIISVGEY
NT seq 4278 nt   +upstreamnt  +downstreamnt
atgagaaggaatattttgggcctcgatctgggcactacttccatcggttttgccaaagta
attgaagatgaagattatcaaaactctgctgttgagctgataggtgttcgtgtaaacccc
ctgaccacggatgaacaaaccaattttgaaaaaggcaggccggtatctgtaaatgctgat
agaacgcttaaaagaggcatgcgccgtaatctggaccgttaccagctccggcggcatcat
ttaattgaggtactgaaagcgaatcatattattacagtggatacaaaacttgctgaggac
ggcaaaaatacaacacatgctacgtatgcggtaagagcattggctgctactgctgaaatt
ccattggaagcttttgctcgggtcctgttggctattaataaaaagcggggctataaaagc
agccggaaagccaagaacgaagatgagggccagctgattgacggaatggctgtagctaaa
agattatatgaagaaaaccttactcccggtcagctctcttacctgttattaaaagagggc
aaaaaatacctgcccgatttttaccggtctgatctgaatgcagagttggataaggtgtgg
agttttcaaaagcaattttatcctgaaatattaacggaagagtttaaaaaacatttggaa
ggaaaaggacagcgggctacatcagccgcattttggggacaatatggttttaatacagca
gaaaataaaggcagcagggaggaaaaaaaactgaaagcctatcaatggcgtagcgaagcc
gttgatcaacaattaacaaaagaggaagtggcttacgtgattactgaaataaacaatgac
cttaataaatccagcggctacctgggggctatttctgaccggagcaaagaattgtttttt
aacaagcaaaccgttggccagtatttatatcagcaactgaaacaaaatccgcacacccgc
ctgaaggggcaggttttttaccggcaggattacctggatgagtttgaaaccatttgggaa
acgcaggcaaagtttcatccagaactgactgctgcattaaaagaagaaattcgtgacgtt
attattttttatcagcgaaaattgaagtctcaaaaagggctgatcagcttttgtgaattt
gagagtaaggaaatagaagttgaaaagaacggactaaagataaaaaagcggataggcttg
cgggttgcacctaaatcatcaccattgttccaggagtttaaaatatggcaggtattaaat
aacctggagtttcgcaacaaaagttccaaagaagtgtttgtgccggatatgactgctaaa
cagcaactctttgacgagcttaatattaaaggaaacctgttagcaagtgaagccataaaa
attctgggttataaaacgaaggattgggaagccaattatcatacgctggaggggaatcgc
accaataaatctttgtacgatgcctatctgaaaattttggaattggagggatatgatgaa
gatctgttgaaattaagcggcagcgatgatattgatgtttccaaaatcgaaaagtccgca
tcagaaattaaacaaatggtgcatgctgtttttgaagttttgggtattaatagcacaatt
ttagattttgacgcagaagcagatggtaaggcatttgagcaacaaacggcatatcggtta
tggcatttgctgtattcagcggaggatgataataaaaaatatttacaggaagatattttt
atatatggacatgataatattggattaaaaaagaagctgtgcgaaaggtttggattcagg
ccagagcatacgaagattttagtgaatgttgctttcagtggggattatggtagtttgagt
agtaaggcaatgcggaaaatttatcccttcatcaaagagcttacttatgacaaagcttgt
agggaagcaggttatagacattccgcctcttcactttcaaaagaagagatagctacccgg
cctttgcaaaagcgactgggtttattgaaaaagaatgaattgcgcagcccggtagtggag
aaaatcctcaaccaaatggttaatgtggtcaatgccctgattgatgatgaaaataaacgg
cgaaaagcccggggcttatctgatgattttcattttgatgaaatacggattgagctggcc
cgtgaattaaaaaagaacgcaaaagagagggctgagatgacaacaaatattaacgccgca
aagcaattacatgagaaaataattaagatcctgcaaacccagtttggagtgtccaatcct
tcccgaaatgatattattcgctacaaactgtacgaagagctaaagaataacggctataaa
gatttatacactaatacctacatctcccccgacatcttgttcagtaagcagattgatata
gaccacatcattccgcaaatgagtttatttgatgatagtttttctaacaaaacggttgtg
tttagaaaagataatcaggataaaggaaataaaaccgcctacgactatatccttggtaaa
tacggagaactggcgttggaagaatatatttcccggataaccagcctttttgaattggga
aagaaaaataaggaagagggcattaacaaggcgaagtttcaaaaattacaaaagcgcctt
attgatataggggatggttttattgaaaaagatctccgggagagccagtatatagctaaa
aaagcaaagaatatgctttatgcaatctgccgtagtgtggttgctaccagcggtgaaatt
acggcaagactgcgtgaggattgggatttggtaaatgtgatgcaggaaattaatttgcca
aaattcagagccctgggcttaacagaaatggttgagaaaaaggatggtggtcaaaaagag
cgtattattgactggactaagcgcaacgatcatcgtcatcatgcgatggatgcattgacc
atcgcttttacacgacatagccatattcagtatttaaatcacctgaacgcacgtaaagat
gaggccagcaaatggcatcctgtcgtgagcaagattgaggaaaaagaaacagacctggtg
tatgatgatctggggaaccgaaaaagaagattcaaggctccaatgcccaactttcgggaa
gtggtaaaagaacatctggaaaatgtgctgatttcacataaggctaagaataaagtagtt
actaaaaataagaataaaataaagacagccaaaggtgagaaaataaaaacggaacttact
ccgcgtggacaattgcacaaagaaaccatttatggcagatatcgctattatgaaagcaaa
gaggaaaaagtaggaccgaagtttgatgcggaaacgattgggatggttgtaaacccacag
tatagaaaacttctgttggaacgacttacaacaaatggaaacgatcctaaaaaggctttc
gggggtaaaaatacgttgagcaaaaatcctctttatattgatgaggccaagcaagagcta
ctgcccgaaaaaattttattgcgttggctgaatgatgattattccattcgcaaagatgta
actcctgaaaacctgaaagatgtaaaaacaattgaaaaagtcttagatgaagggattaaa
aaaatactgttgaagcgtcttgtcgattttggcaatgatcccaagaaagctttttccgac
ttggataaaaacccaatatggttgaatgaggccaaaggaattactataaaacgggtaacc
atcagcggtgttaaaaatgcagaagcgctacattataaaaaagaccattttgggaatgct
attttaaatgaaaacggaaagctgatacccagttcttttgtaagtaccggcaacaatcat
cacgtagctatttaccgggatgcagaggggaatttgcaggaaagggttgtttcattattt
gatgctgtgcaattagtaaatgccggagaggcagtgattgatagggagtataacaaaggg
ataggctggcaattcctgtttacaatgaagcaaaatgaaatgtttgtattcccaaatgaa
aaaacagggtttgatcctaaggaaattgatttattaaatactgataatagaaagttgatt
agtcctaatttgtttagagtacagaaaatagcgagtaaaaactatttctttcgacatcat
ttggaaacgaatgttgaagaaaggaaggagttaaaggatattgtatataagcctcaatta
ggattaaatgcaataaaagatgtcgtcaaagtccgtatcaatcatttggggaagattatt
agtgtaggagagtattaa

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