Niallia sp. Kr1: Q5760_04295
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Entry
Q5760_04295 CDS
T11525
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
niak Niallia sp. Kr1
Pathway
niak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
niak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q5760_04295 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niak03400
]
Q5760_04295 (uvrB)
DNA repair and recombination proteins [BR:
niak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q5760_04295 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q5760_04295 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
P-loop_SecA
AAA_22
HEM4
AAA_7
UFL1
AAA_19
AAA_16
DUF87
TrwB_AAD_bind
AAA
AAA_5
AAA_25
DUF6616
DUF748
Motif
Other DBs
NCBI-ProteinID:
XTP55288
LinkDB
All DBs
Position
889826..891805
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AA seq
659 aa
AA seq
DB search
MENQFQLVSKYTPQGDQPQAIEKLVDGIKKGKKHQTLLGATGTGKTFTVSNVIQQINKPT
LVLAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYFQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERNDVIIIASVSCIYGLGSPEEYSRQVLSLRVGMEVERNQLLRKLVDIQ
YDRNDLNFIRGTFRVRGDVVEILPASRDEHCIRVEFFGDEIDRIREVDALTGEILGDRDH
VAIYPASHFVTREEKLKVAIANIEKELEERLSELREDGKLLEAQRLEQRTRYDLEMMREM
GFCSGVENYSRHLELRTAGSTPYTLLDYFPKDFLMIVDESHVSIPQVRGMYNGDQARKQV
LVDYGFRLPSAKDNRPLKFEEFEKHINQIVYVSATPGPYEMEHAPDVIEQIIRPTGLLDP
IIDVRPIEGQIDDLIGEINERIEKNERVLVTTLTKKMSEDLTDYLKEIGIKVQYLHSEVK
TLERTEIIRDLRLGKYDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNSNGRVIMYADKMTHSMEVAISETKRRRAIQEEYNERHGITPTTIVKEIHEVIRATH
AAEEQEQYNPTEDLSKLPKKEREKVIAEMENEMKEAAKALNFERAAELRDILLELKAEG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ttggagaaccaatttcaattagtatcaaagtatacaccacaaggggaccagcctcaagca
atcgaaaaacttgtggatggcataaaaaaaggaaagaaacatcaaaccttgctcggtgct
acaggaacaggaaaaacctttacggtttcaaatgtcattcaacaaattaataaaccaaca
ttagtgttggctcataataaaactcttgctggtcagttatacagtgagtttaaagaattt
tttcccaataacgctgttgaatattttgtcagttactatgattattttcaaccagaagcc
tatgtccctcaaacagatacctttattgagaaggatgcgagtattaatgatgaaattgat
aaattgagacacagtgccacctcgtcattatttgagcgaaatgatgtcattattattgcg
agtgtgtcttgtatatatggtttaggttcgccggaagaatatagcaggcaagttctatct
ttaagagtcgggatggaagtggagcgaaatcagcttctacgtaaacttgtcgacatccaa
tatgaccgaaatgatttgaactttattcgtggtaccttccgtgttcgtggcgatgtcgtg
gaaatacttccggcatcaagagatgagcactgcattagagtagaattctttggtgacgag
atcgatcgaattcgagaagtggatgcactgacaggcgaaattctcggcgaccgggatcat
gtcgccatctatccggcatcccacttcgttactcgtgaggaaaaactaaaagtagccatt
gccaatattgaaaaggaattggaagagagactctcagaacttcgagaagacggaaaactc
cttgaggcacaacgtcttgaacagaggactcgctacgatttagaaatgatgagggaaatg
ggattttgttctggagttgagaactactcccgtcatcttgagttacggacagcaggctca
acaccgtacacattgcttgattattttccaaaggattttctgatgattgtcgatgaatcc
cacgtttcgattccacaggttcgcgggatgtacaacggagaccaagcgagaaagcaagta
ttggttgattatggtttccgcttgccttcagcaaaagacaatcgtccattaaaatttgag
gaatttgaaaaacatattaatcaaattgtttatgtttctgccactcctggtccctatgaa
atggagcatgcaccagacgttattgaacaaattattcgtccaactggattgcttgatccg
attattgatgttcgtccaattgaaggacaaatcgatgatttaattggtgaaattaatgaa
cgaattgaaaaaaatgagcgtgtcttggtaacaacattaacgaaaaagatgtcagaagac
ttaactgattatttaaaggagatcggcatcaaagtacaatatcttcactctgaagtaaaa
acgttagaacggacagaaattatacgagatcttcggttagggaagtatgatgtattaatt
ggaatcaatcttttaagagaaggattggatattcccgaagtatccttagtagccattcta
gatgcggataaagaaggcttcttacgctctgaacgttctttgattcaaaccattggtcgg
gcggcacgtaattcgaatggacgtgttattatgtatgctgataaaatgacgcattcgatg
gaagtagccatttcagaaacaaaacgtcgtcgcgccatacaagaggagtacaatgaaaga
catggcattacaccaacgacgattgtaaaggagatacatgaggtcatccgtgcaacacac
gcagcggaggaacaagagcaatacaacccaacagaagatttgtcaaaactaccgaaaaaa
gaacgcgaaaaggtaattgccgaaatggaaaacgaaatgaaggaagcggccaaagctttg
aacttcgaacgagccgcagagcttcgtgatatattattagaattgaaagcggaaggatga
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