Niallia sp. Kr1: Q5760_15885
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Entry
Q5760_15885 CDS
T11525
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
niak Niallia sp. Kr1
Pathway
niak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
niak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q5760_15885 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niak03019
]
Q5760_15885 (pnp)
03016 Transfer RNA biogenesis [BR:
niak03016
]
Q5760_15885 (pnp)
Enzymes [BR:
niak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Q5760_15885 (pnp)
Messenger RNA biogenesis [BR:
niak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q5760_15885 (pnp)
Transfer RNA biogenesis [BR:
niak03016
]
Prokaryotic type
tRNA degradation factors
Q5760_15885 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
Lipase_GDSL_lke
Motif
Other DBs
NCBI-ProteinID:
XTP52873
LinkDB
All DBs
Position
complement(3274710..3276830)
Genome browser
AA seq
706 aa
AA seq
DB search
MEQDKHVYSIDWSGRKLTVEIGQLAKQANGAVLVRYGDSAVLSTATASKEAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSLILSV
DQDCSTEMAAMFGSSLALSVSDIPFEGPIAGVIVGRIDGQFVINPTVEQLEKSDIHLTVA
GTKDAINMVEAGADEVPEETMLEAIMFGHDEIKRLIAFQEQIVAEIGKEKMEVVLAEVDA
ELESEVRDICETEMIQAIQVQEKHAREEAIKKVKDEVLAKYQENEAEDEVIKQVNQILDK
LVKGEVRRLITEEKIRPDGRKADEIRPLSSEVGLLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGLEEEKRFMHHYNFPNFSVGETGPMRGPGRREIGHGALGERALSAVIPDEK
EFPYTIRLVAEVLESNGSTSQASICAGTLAMMDAGVPIKAPVAGIAMGLVKSGEHYTILT
DIQGMEDHLGDMDFKVAGTAKGVTALQMDIKIEGLSREILEEALQQAKTGRMQILESMLS
TIQKPREQLSAFAPKILTMKINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
TNEEMNQKAKQIIEDIVREVVVGQLYLGKVKRIEKFGAFVEIFQGKDGLVHISELAEERV
GKVEDVVKIGDEMLVKVIEIDKQGRVNLSRKVVLKEQRQREESAQS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagataagcatgtatattcaatagattggtcgggacgcaaattaaccgttgaa
attggccaattagctaaacaagcaaatggggcagttcttgtccgatatggagattcagct
gtattaagtacagctacagcttcaaaagaagcaaaaaatgtggactttttcccattaaca
gttaactacgaggaaagactttacgctgttggaaaaattccaggaggctttattaaaaga
gaaggccgtcctagtgagaaggccattttggcgagccgtttaatcgatcgcccaattcgc
ccgttgtttgcggatggttttcgtaatgaagtacaagttgtaagtttaattttaagtgtt
gatcaagattgttcaactgaaatggcggccatgtttgggtcatcccttgcacttagtgtt
tcagatattccatttgagggaccaattgctggagttattgttggtcgtattgatggtcag
tttgtcattaacccaacagttgaacaactggagaaaagtgatattcatttaacagtagca
ggaacaaaagatgccattaacatggtagaagctggagcagatgaagtcccagaagaaacg
atgctagaagccatcatgtttggtcatgatgaaatcaagcgtttaattgccttccaagag
caaatcgttgctgaaattggaaaagaaaaaatggaagtggttcttgctgaagtggatgct
gaactagaatcggaagttcgagacatatgtgaaactgaaatgattcaagcgattcaggtg
caggaaaaacatgcacgtgaagaagctataaagaaagtcaaagatgaagtactggcaaag
tatcaagaaaatgaagctgaagatgaagtaattaaacaagttaaccaaattttagataaa
cttgtaaaaggtgaagttcgtcgtctgattacagaagaaaaaatccgtccagatggtcgt
aaagcagatgaaattcgtccattatcttctgaggttggattattaccaagaacacatggt
tctggattatttactcgaggacaaacacaagcattaagcatttgtacactaggtgctcta
ggagacgtgcaaattttagatggtcttggtcttgaagaagaaaaaagattcatgcaccac
tataacttccctaattttagcgtaggggaaacaggtccaatgagaggaccaggtcgacgt
gaaattggacatggtgcccttggtgaacgagccctatcagctgtgattccagatgaaaaa
gaatttccatataccattcgccttgttgctgaagtattagaatcgaatggttctacttca
caagcaagtatttgtgcaggtacactagcgatgatggatgcgggagttccaattaaagcg
cctgttgctggaattgcaatgggtcttgtcaaatcgggtgaacattatacgattttaacc
gatattcaaggaatggaagaccatcttggggatatggactttaaagtagctggtacagca
aaaggtgtcacagctcttcaaatggatattaaaattgaagggttatcaagagaaatctta
gaagaggcattacaacaagcgaaaacaggtcgtatgcagattttggaatcaatgctttca
acgattcaaaagccacgtgaacaactatcagcttttgcacctaaaatcttaacgatgaag
attaatcctgataaaatccgtgatgtgattggaccaagtggtaaacaaattaacaaaatt
attgaagaaactggcgtaaaaattgatattgagcaagatggaactgtctttatttcatct
acaaatgaagaaatgaatcagaaggcaaaacagattattgaagatattgttcgagaagta
gtggttggacaactttatcttggtaaagtaaaacgaatagaaaagtttggtgcgtttgtt
gaaatcttccaaggaaaagatggtcttgtccatatttctgagctagcagaagaacgtgtt
ggaaaagttgaagatgtagtaaaaatcggagacgaaatgctagttaaggtaatcgaaatt
gataaacaaggtcgcgtaaatttatcaagaaaagtagttttgaaagaacaacgtcaacgt
gaagaaagtgctcaaagttaa
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