Nibribacter ruber: GU926_00750
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Entry
GU926_00750 CDS
T06388
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nib
Nibribacter ruber
Pathway
nib03420
Nucleotide excision repair
nib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GU926_00750
03430 Mismatch repair
GU926_00750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nib03400
]
GU926_00750
Enzymes [BR:
nib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GU926_00750
DNA repair and recombination proteins [BR:
nib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GU926_00750
MMR (mismatch excision repair)
Other MMR factors
GU926_00750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QHL86048
UniProt:
A0A6P1NVP2
LinkDB
All DBs
Position
complement(187562..189802)
Genome browser
AA seq
746 aa
AA seq
DB search
MDYLKLLNESQRAAVLNTEGPCMIIAGAGSGKTRVLTYRIAHLLEKGVDPFNILSLTFTN
RAAKEMRGRIEKVVGPEAKNLWMGTFHSVFSRILRAEATKIGYPSHFTIYDSDDSKTLIR
NIVKEMNLDDKLYKPNVVLGRISGAKNKLISVAQYLRDASIQADDEAALRPKIGQIFKTY
QERCFKAGAMDFDDLLFNTNVLFRDHVDVLNKYQNIFKYVMVDEYQDTNYSQYLITRKLA
AKDRNICVVGDDAQSIYAFRGADITNILNFERDYPELAVFKLEQNYRSTQHIVKAANSVI
KNNKAQLRKDVFSENEEGNLVDVIKASSDNEEGKLVAHAIFEEKMNQHLSYEDFAILYRT
NAQSRAMEEALRKMNIKYRIVGGLSFYQRKEIKDLISYLRLSINHNDEQALRRIINYPKR
GIGDTTVEKLIVTANDTNHSIWEVVSHATQLGMGRAGVAIDEFATKIKSFAVVAQQKDAF
EAATYIAKHSGLVDDLYADKTVEGLARYENIQELLNAIKEFVDDPEKEDKSLPAFLQDIA
LLTDADTKKEEEGEYVTMMTIHSAKGLEFRNVFIVGMEENLFPSQMMLSSRADLEEERRL
FYVAITRAEKKLTLSYATSRYQWGNLRSAEKSRFVDEIDPTYLNFKFGDERGPFEKVLQR
KTPVSQLITPAKKPTVAPNYTPSADFTPSDTSNLQAGMRVEHPKFGFGTVTKMDTQGNST
KAIIEFEGVGEKTLLLSFAKLKVHAS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggattatcttaaactcctaaatgagtcacagcgcgccgctgttttaaatactgaaggc
ccttgtatgatcattgccggtgcgggctccggcaaaacccgggtactcacctaccgcatt
gcgcatttgctggagaagggcgtggacccgttcaatatcttgtccctcacctttaccaac
cgcgccgccaaagagatgcgcggccgtattgagaaagtggtaggccctgaggcgaagaac
ctctggatgggtacgtttcactccgttttctcccgtattctgcgcgccgaggccaccaaa
ataggttaccctagccacttcaccatctatgattctgatgactccaagacgctcatcaga
aacattgtgaaggagatgaacctagacgacaagctctacaaaccaaacgtggtgctgggc
cgaatctctggggcgaagaacaaactcatatcagtggcgcagtacctgcgggatgcttct
attcaggcagacgatgaggcggccttaagaccgaagattggccagattttcaaaacctac
caggagcgttgctttaaggccggtgccatggactttgacgatttgctgttcaacacaaac
gtgctcttcagagatcacgtggatgtcctgaacaaataccagaacatcttcaagtacgtg
atggtagatgagtatcaggataccaactacagccagtaccttatcaccagaaaacttgcc
gccaaagacaggaacatctgcgtggtgggtgatgatgcccaaagtatctatgcgttcagg
ggtgcggacattaccaacattctcaactttgagcgtgactatccagagctggccgtattc
aagctggagcagaattaccgctctacccagcacattgtaaaagcggctaactctgtcatc
aagaacaataaagcgcagctgcgcaaggacgttttctctgagaacgaagaaggtaatctg
gtagacgtcatcaaagccagctcagacaatgaggaaggcaaactggtggcgcacgccatc
tttgaggagaagatgaaccagcacctctcttatgaggacttcgccatcttgtaccgcacc
aacgcccagtcaagggccatggaagaggccttacgcaagatgaacatcaagtaccgtatt
gtgggcggcttgtcgttctaccagcggaaagagattaaggatttgatttcctacctgcgg
ctttccatcaaccacaatgacgagcaggccttgcgccgcatcatcaactacccaaaacgc
ggtattggtgacaccacggtagagaaactcattgtgacggccaatgacaccaaccacagc
atctgggaagtggtgagccatgccacgcagttgggcatgggccgtgccggcgtggccatt
gacgagttcgcgaccaagatcaagagctttgccgtggtagcccagcaaaaggacgccttt
gaggccgccacctacattgccaagcattcgggtctggtagatgatttgtacgctgataag
accgtggaaggcctggcccgctacgagaacatccaggagcttctgaacgccatcaaagag
tttgtggatgaccctgaaaaagaagacaagagcctaccagccttcttgcaagacattgcc
ttgttgacggatgcagacaccaagaaagaggaagaaggcgaatacgtgaccatgatgacc
attcactcggcgaagggtctggagtttaggaacgtgttcattgtgggcatggaagaaaac
ctgttcccgagccagatgatgctttcttcgcgcgctgacctggaagaggaacgccgtctg
ttctacgtggccatcacccgcgccgaaaagaagctgaccctctcctacgctaccagccgc
taccagtggggcaacctgcgcagcgctgaaaaaagccgttttgtggacgagattgatcct
acctaccttaacttcaagttcggcgatgagcgtggcccgtttgagaaggtgttgcagcgc
aaaaccccggtaagtcagctcatcacgccggccaaaaaacctaccgttgcgcccaattat
acgccttcggctgacttcacgcccagcgatacttctaacctgcaggccggtatgcgcgta
gagcaccctaaattcgggtttggcacggtcaccaaaatggacacccagggcaactctacc
aaggccatcattgaatttgagggcgtgggtgagaaaaccctgcttttgagtttcgccaag
ctcaaggtgcacgcttcttag
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