Nibribacter ruber: GU926_01410
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Entry
GU926_01410 CDS
T06388
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nib
Nibribacter ruber
Pathway
nib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GU926_01410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nib03400
]
GU926_01410
Enzymes [BR:
nib01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GU926_01410
DNA repair and recombination proteins [BR:
nib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GU926_01410
Prokaryotic type
GU926_01410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QHL86174
UniProt:
A0A6P1NV08
LinkDB
All DBs
Position
330004..330666
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AA seq
220 aa
AA seq
DB search
MQVKIESSWQEVLQDEFEKPYFKNMTQFVKEEYARTEVYPPGKLIFHAFEECPFDQVRVV
ILGQDPYHGKGQANGLAFSVAEGVRTPPSLQNIFKEIHSDLGKPIPATGNLERWAEQGVL
LLNATLTVRAHEAGSHQKKGWEEFTDAVIQKVSDLKVHVVFMLWGAYAQKKGAVIDEKKH
LVLRAAHPSPFAADKGFFGTRHFSKANAYLKQHGLPEIEW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaaagatagaatcaagttggcaggaggtgctacaagacgagtttgaaaagccg
tacttcaagaatatgacgcagtttgtgaaggaagaatatgcccgcacagaggtttacccg
cccggcaaactcattttccatgcctttgaagaatgtccctttgaccaagtgcgtgtggta
attctaggccaggacccgtaccacgggaaagggcaggccaacggcttggcgttctcagtg
gctgagggtgtgcgcacgccgccctccctgcaaaatattttcaaggagattcattctgat
ttgggcaaacccattccggccacaggaaatttggagcgctgggcagaacagggcgtcctt
ttgcttaatgctaccctcacggtacgagcgcatgaggcaggttctcaccagaaaaaaggc
tgggaggaatttacagacgccgtcatccagaaagtatctgacttgaaagtgcacgtagta
ttcatgctgtggggcgcatatgcacagaagaaaggtgccgtcatagacgagaagaagcac
ctggtgctaagagcggcccacccgtctccgtttgccgctgacaaaggcttctttggcacc
cggcacttcagcaaggccaatgcctacctcaagcaacacggattgcccgagattgaatgg
taa
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