Nibribacter ruber: GU926_02115
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Entry
GU926_02115 CDS
T06388
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nib
Nibribacter ruber
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nib03032
]
GU926_02115
03400 DNA repair and recombination proteins [BR:
nib03400
]
GU926_02115
Enzymes [BR:
nib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GU926_02115
DNA replication proteins [BR:
nib03032
]
Prokaryotic type
DNA Topoisomerases
GU926_02115
DNA repair and recombination proteins [BR:
nib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GU926_02115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HMD_N
Motif
Other DBs
NCBI-ProteinID:
QHL86301
UniProt:
A0A6P1NXB8
LinkDB
All DBs
Position
489492..490562
Genome browser
AA seq
356 aa
AA seq
DB search
MEKTLTAGALYADVAASAQQAGLRYLPDTKPGITRKAKGKKTEYFSAKGEKITDEKTLAR
LEKLVIPPAWTDVWISPSANGHIQVTGRDAKGRKQYIYHPDWQQSRSLNKFGRMIAFGKA
LPGIREQVEKDLRLKNLNKRKLLAIVVELLDNSFIRIGNKAYAKENKSFGLTTLRDRHAT
VEGDLLKLEFVGKKGIKHEISIKDRRLARLVKQCQDIPGYDLFQYYDEDGQRQTLESGDV
NDYLRSLSEEDFTAKDFRTWGGTVTMVECLENVLEENPEIEKEASVKEAVKMVAKELGNT
PTVCSKYYIHPEVVNLFKQDKLIDYLRKHDARKRKENPYLSRTEEFVMRMLKEVNK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaactctaactgccggggctttgtacgcagacgtggctgcttctgcgcaacaa
gccggcttgcgctacctgccagacaccaaaccgggcatcaccagaaaagcgaaaggcaaa
aagaccgaatacttctctgccaaaggcgagaaaataaccgatgagaaaaccctggcccgt
ttggagaaactggtgattccgccggcctggaccgatgtctggatttctccctcggccaac
ggccacatccaggtcacgggccgcgacgccaaagggcggaagcagtacatctaccaccca
gattggcagcagagcagaagcttgaacaagtttggccgcatgatcgccttcggaaaggcg
ctgcccggcatacgggaacaggtagagaaagaccttcggcttaaaaacctgaacaagcgc
aaacttctggctattgtggtggaactgctggacaactctttcatccggattgggaacaag
gcctatgccaaggaaaacaagtcgttcggactgaccaccttgcgggaccgccatgccaca
gtggaaggtgatttgctcaagttggagtttgtgggcaagaagggcattaagcatgagatt
agcatcaaggaccgaaggctggcccgcctggtgaaacagtgccaggatattccgggctac
gacctgttccagtactatgacgaagacgggcagcggcaaaccctggagtctggcgacgtg
aacgactacttgcgttctttgagcgaggaagatttcacggccaaggatttcaggacctgg
ggcggcaccgtgaccatggtagaatgcctggagaacgtgctggaagaaaaccccgagatt
gagaaagaagcctctgtaaaggaagccgtgaaaatggtagccaaagaactgggcaatacg
cccaccgtctgcagcaaatattacattcacccagaagttgtcaacctgttcaaacaagac
aaactcattgactacctccgcaagcatgacgccagaaagagaaaggaaaacccttatctt
tcccgcactgaagagtttgtgatgcgaatgctgaaagaggtgaataagtaa
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