Nibribacter ruber: GU926_04300
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Entry
GU926_04300 CDS
T06388
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nib
Nibribacter ruber
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nib03016
]
GU926_04300
Enzymes [BR:
nib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GU926_04300
Transfer RNA biogenesis [BR:
nib03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GU926_04300
Prokaryotic type
GU926_04300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QHL86698
UniProt:
A0A6P1NXQ1
LinkDB
All DBs
Position
1015258..1016175
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AA seq
305 aa
AA seq
DB search
MDFELKILGSSSATPSFDRHHTAQLLAIGNQLNLIDCGEGTQMQLMRYKVKHQRICNIFI
SHLHGDHYFGLPGLLSTMHLQQRTAPLNLFGPKGLAEILTLQFKYAGTQLPYKINFHEVD
TTVCRKIFEDKTITVHTLPMQHRINCCGYLFKEKQKPRHLLKSKLPAFLTPPQLVRLKWG
EDVLDEAGQVLVRNVEVTTEPKHSRSYAYCSDTKYKEDILPMIKGVDLLYHESTFLSDMT
QRADYTFHSTAQQAATLALKAQVKRLLIGHFSARYKDLTPLLAEAQAVFPNTNLAVEGKT
ISVLE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggactttgagctaaaaattcttggcagttcttctgctacgccctcttttgaccgacat
cataccgcccaacttttggcaattggcaatcaattaaacctgattgattgcggagaaggt
acacaaatgcagctgatgcgttacaaagtaaagcatcagcgcatttgtaacatcttcatt
agtcacctccacggtgaccattattttggcttacccgggttgctgtccactatgcacctg
cagcagcgtaccgcccctctcaaccttttcggccccaaaggcttagccgagatactaacc
ctccagtttaagtacgccggcacccagcttccttacaagatcaatttccatgaagtagac
accaccgtctgccggaaaatctttgaggacaaaaccattaccgtgcacaccttacctatg
cagcaccgcatcaattgctgcgggtatctgttcaaggaaaagcaaaaaccccgacacctg
ctcaaaagcaagcttcctgccttcttgacgccgccgcaactggtgcgcttgaaatggggc
gaggatgttctagatgaggccgggcaagtattggtgcgcaacgtggaggtgaccactgag
cccaagcatagccgtagctatgcctactgttcagataccaaatacaaagaagatattcta
cccatgatcaaaggcgtggacctgctttaccatgaatctactttcctaagtgacatgacc
cagcgcgcggactatactttccatagcaccgcccagcaggccgctacgttggctttaaaa
gctcaggtgaagcgtctgcttatcgggcacttctcagcgcgctacaaggacctgacgccg
ttgctggcagaggcgcaggctgtgttccccaatactaacctagcggtggagggtaaaacg
attagcgtcttggagtag
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