Nibribacter ruber: GU926_04870
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Entry
GU926_04870 CDS
T06388
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nib
Nibribacter ruber
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nib03032
]
GU926_04870 (topB)
Enzymes [BR:
nib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GU926_04870 (topB)
DNA replication proteins [BR:
nib03032
]
Prokaryotic type
DNA Topoisomerases
GU926_04870 (topB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
DUF3945
RPA_interact_C
Zn_ribbon_PADR1
Upf2
Motif
Other DBs
NCBI-ProteinID:
QHL86806
UniProt:
A0A6P1NSI9
LinkDB
All DBs
Position
complement(1152149..1154617)
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AA seq
822 aa
AA seq
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MKVCIAEKPSVAREIAHVIGANSRKDGYFEGNGYQVTWTFGHFCQLNEPDDYNPHWKRWH
LPDLPLVPEKFDIKLIQNKGVAQQFKVIKQLIDGAEEVINCGDAGQEGEVIQRWVLYQAR
CRKPVKRLWISSLTEEAIRQGFSKLRDGKEFDQLYQAGRSRAIGDWLLGINATRLFTLKY
AQGRQLLSLGRVQTPTLAMIVQRHLEILNFKPEPFFELKTVYRDVTFSSTNGRFKDEEKA
LAILEQIKPSEFEIKDVETKKGTESSPRLFDLTSLQVECNNKFAMSADETLKTVQSLYEK
KVVSYPRVDTTYLPDDIYPKIPNILTGLREYSHLMQELQGKKIRKSAKVFNNNKVTDHHA
IIPTGATSGNLFGTEAKVFDLVAKRFIAAFYPDCIVSNTVVSGEAANHAFRAKGKQILEP
GWRVVYAQEETKTPAKPTAPKTTMDGEEKEEELAVLPHFDAGERGPHSPLLERKMTSPPK
DYTEATLLRSMETAGKQVDDDELKEALKENGIGRPSTRAAIIETLFKRNYIRKEKKKILP
TQTGIDLIQVIKNPTLKSAEMTGQWEKKLRQIEAGEFEATEFLRELQQLVEEMVQEVKQD
RASVTLQPMELTKPVPKDGAKKDAKPKKEAKNGSAPAAAGLGTCPVCKTGHVVKGSQAYG
CVRFKEGCQFRLPMQTHGKPLTEKHVQALLKKGKTPVIKGLVDASSGEKFDGALQLDAAF
ALHAEKAEPKTKKPSVWICPKCQQGQMLKGKSAYGCSRYKEGCQFVVPFELHGRTLSESH
LSALLTKGKTAKIKGFISPKTGNSFDAALKLNEEFKVVYLFD
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtctgcattgccgaaaaacccagcgtagcccgtgaaattgcccatgtgattgga
gccaatagccggaaagacggttattttgaaggcaatggctaccaggtcacctggacgttc
gggcacttctgccaactcaacgaaccagatgattacaacccccactggaaacgctggcat
ctgccagacctccccttggtgcccgaaaagtttgacatcaaactcattcagaacaaaggc
gtggcccagcagtttaaagtcatcaagcaattgatagacggcgctgaggaagtgatcaat
tgcggtgatgccgggcaggagggagaagtgattcagcggtgggtcttgtatcaggcgcgc
tgccgcaaacccgtcaagcgtctctggatttcttcgctcaccgaagaagccattcggcag
gggttttctaagctgcgcgatggcaaggaatttgaccagttgtaccaagccggcagaagc
cgcgccattggtgattggctactaggcatcaacgccacgcgcctatttactttgaagtat
gcgcaaggccgtcagctcctttccttgggccgtgtgcaaacgcctacgctggccatgatt
gtgcagcgccacctggaaattctcaacttcaagccagagcccttctttgaacttaagacc
gtataccgtgacgtgacgtttagcagcaccaacgggcggttcaaagacgaagaaaaagcc
ttggccattctggaacaaatcaaaccgtctgagtttgaaatcaaggacgtagagaccaag
aaaggcaccgaaagttctccgcggctttttgacctgacctctctgcaggtggagtgcaac
aacaagtttgccatgtctgcagatgagacgcttaaaaccgtgcaaagtctgtatgagaaa
aaagtagtttcctatccaagggtagacactacctatttgccagatgacatctatcccaag
attcctaacatcttgaccggcttgcgcgagtacagccatttgatgcaggaactacaagga
aagaagatcagaaagagcgccaaagtttttaacaacaacaaagtcacagaccaccacgct
atcattcctacgggagcgacttcgggtaatttgtttggcacagaggcaaaagtgtttgac
ctggtggccaagcgctttattgccgccttttacccagactgtattgtgagcaatacggtg
gtgagcggcgaggcggctaaccatgcgttcagggccaaaggcaagcaaattctagagccc
ggctggcgcgtggtgtacgcccaggaagaaaccaaaacgcctgccaaacccactgctccc
aagaccacaatggatggagaggagaaggaagaggagttggcggtgcttccgcattttgat
gccggcgagcgtggtccgcatagccctttgctggagcgtaaaatgaccagtccgcccaaa
gactacactgaggccactttgttgcgctccatggaaaccgccggcaagcaggtagatgat
gacgaactgaaagaagcgctcaaagaaaacggcattggccggccgtctacccgtgccgcc
atcattgagacgcttttcaaacgcaactacatccggaaggagaagaagaaaatccttccc
acccaaaccggcattgacctgattcaggtgattaaaaaccctacccttaaatctgcggag
atgacgggccaatgggaaaagaaacttcgccagattgaagccggtgaatttgaagccacc
gagtttctgcgcgagttgcagcagttggtagaggagatggtgcaggaggtaaagcaagac
agagcgtccgtcactttgcaacccatggaactcactaaacctgtccccaaagacggcgct
aaaaaagacgcaaaacccaaaaaagaggccaaaaacggatcggctcctgctgctgctgga
ttgggtacttgtcccgtctgtaaaaccggtcacgtggttaagggtagccaggcatacggc
tgcgtgcggttcaaggaaggctgccagttcagactgcctatgcaaactcatggcaaaccc
ctcaccgaaaagcacgtgcaggccctgctcaagaaaggcaaaaccccggtaatcaaagga
ttggtagacgcttcctccggtgaaaaatttgacggcgcccttcagctggatgccgccttt
gcccttcatgcagaaaaggccgagcccaaaactaaaaagccctccgtctggatctgcccc
aaatgccagcagggccagatgctcaaaggcaaaagtgcctacggttgcagccgctacaaa
gagggctgtcaatttgtagttccctttgaactacacggccgcactttaagcgaaagccac
ctctcggccttgctcaccaaaggcaagaccgctaaaatcaaaggcttcatttcccctaaa
accggcaacagctttgacgccgccctaaagttgaatgaggagtttaaagtagtgtatctg
tttgactaa
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