Nibribacter ruber: GU926_05325
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Entry
GU926_05325 CDS
T06388
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase (quinone) flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nib
Nibribacter ruber
Pathway
nib00020
Citrate cycle (TCA cycle)
nib00190
Oxidative phosphorylation
nib00650
Butanoate metabolism
nib00720
Other carbon fixation pathways
nib01100
Metabolic pathways
nib01110
Biosynthesis of secondary metabolites
nib01120
Microbial metabolism in diverse environments
nib01200
Carbon metabolism
Module
nib_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nib_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GU926_05325 (sdhA)
00650 Butanoate metabolism
GU926_05325 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
GU926_05325 (sdhA)
00720 Other carbon fixation pathways
GU926_05325 (sdhA)
Enzymes [BR:
nib01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GU926_05325 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
GIDA
AlaDh_PNT_C
NAD_binding_8
FAD_binding_3
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
QHL86889
UniProt:
A0A6P1NXG7
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All DBs
Position
1262144..1264057
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AA seq
637 aa
AA seq
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MILDSKIPEGPLAEKWDKHKFNVKLVNPANKRKYDVIVVGTGLAGASAAATLGELGYNVK
AFCYQDSPRRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTIKGGDYRAREANVYRLAQVS
VNIIDQCVAQGVPFAREYGGLLANRSFGGAQVSRTFYARGQTGQQLLLGAYSALNRQIAY
GKVKMYPRTEMLDLVMVDGKARGIVTRNLVTGEIESHSAHAVILATGGYGNVFFLSTNAM
GSNTTAIWRAHKKGALFANPCFTQIHPTCIPVSGGHQSKLTLMSESLRNDGRVWVPKAVG
DNRIASDIPEDERDYFLERKYPSFGNLVPRDVASRNAKLACDEGRGVGTTKLAVYLDFAD
AIKREGLNAISQKYGNLFEMYEKITGENPYEQPMRIYPAVHYTMGGLWVDYNLMTTIPGL
YATGECNFSDHGANRLGASALMQGLADGYFVIPYTIGDYLAQNPTARVETSHPAFKEAEQ
AVRADVDRLLSINGSRTVDDFHKALGLLMWDYCGMARNAEGLQYAKQEIRKLREDFWKDV
KILGTNEELNVTLEKAGRVADFLELGELMVDDALNRNESCGGHFREEYQTPENEALRDDE
NYAYVAAWEYTGPNQQPVLHKEDLKFENVKLTQRSYK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgattctagattctaagattcccgaagggccactggccgagaaatgggacaagcataaa
ttcaatgtgaagctggttaacccagctaacaagcggaaatacgatgtgattgtggtagga
accggtctggccggtgcttctgccgccgctactctaggtgaactgggctacaacgtgaaa
gcgttctgctaccaggacagcccgcgccgcgcgcactccattgccgcgcagggtggtatc
aacgccgccaagaactaccagaacgacggtgacagcgtgtaccgcctcttctatgacacc
atcaaaggcggtgactaccgtgcccgcgaagccaacgtgtaccgtctggcccaggtgagt
gtgaacatcattgaccaatgcgtggcccaaggtgttccttttgcccgtgagtacggcgga
ttgctggctaaccgctcttttggtggtgcccaggtaagccggacgttctacgcccgtggc
caaacaggccagcaattgttattgggtgcctattctgccttgaaccgtcagattgcctac
ggtaaagtaaaaatgtacccacgcaccgagatgctggacctggtaatggtagacggcaag
gctcgtggtattgtaacccgtaatttggttacgggtgagattgagtcgcatagcgcgcat
gccgttattttggccacaggtggttatggtaacgtattcttcttgtctaccaacgccatg
ggttctaacaccacggccatctggagagcgcacaagaaaggtgctttgttcgctaaccct
tgcttcacgcagattcacccaacctgtattccggtttcgggtggtcatcagtctaaactg
accttgatgtctgagtcgttgagaaacgatggacgtgtttgggtacctaaagcagtaggt
gacaaccgcattgccagcgacattccagaagacgagcgtgattatttcctggaacgcaaa
tatccatccttcggtaacctagtaccacgtgacgtggcttcgcgtaacgctaaattggcg
tgtgacgaaggacgtggcgttggaaccaccaaactggctgtttatcttgattttgcagac
gctatcaaacgcgaaggcttaaacgccatcagccagaagtacggcaacttgtttgagatg
tacgaaaagatcactggtgagaacccgtatgaacaaccaatgcgcatttacccagcggtg
cactacaccatgggcggcctttgggtagactataacttgatgaccaccatccctggcttg
tacgccacgggtgagtgtaatttctctgaccacggtgccaaccgcttaggggcttcggct
ttgatgcaaggtctggcagatggctattttgtgattccgtacaccattggtgactacctg
gcgcaaaacccaactgcccgcgtggagaccagccaccctgcttttaaagaagcagagcag
gccgttcgcgctgatgtggatcgtttgttgagcatcaatggtagccgcacggtagatgat
ttccacaaggcgctgggtctattgatgtgggattactgcggtatggcccgtaacgccgaa
ggcttacagtatgccaagcaagaaatcagaaaacttcgtgaagacttctggaaagacgtg
aagattctgggtaccaacgaagaactgaacgtgaccctggagaaagccggtcgtgtggct
gacttcctggagttaggtgaactgatggtagacgacgccttgaaccgcaacgagtcttgt
ggtggtcacttccgcgaggaataccagaccccagaaaacgaagccctgcgtgatgatgag
aactacgcctacgtagccgcctgggaatataccggccctaaccaacagccggtgttgcac
aaagaggatctcaagtttgagaacgtaaaactcacgcagcggagctataaataa
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