Nibribacter ruber: GU926_05370
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Entry
GU926_05370 CDS
T06388
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nib
Nibribacter ruber
Pathway
nib00470
D-Amino acid metabolism
nib00550
Peptidoglycan biosynthesis
nib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GU926_05370 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GU926_05370 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nib01011
]
GU926_05370 (murD)
Enzymes [BR:
nib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GU926_05370 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nib01011
]
Precursor biosynthesis
Amino acid ligase
GU926_05370 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
DAO
Pyr_redox_3
3HCDH_N
Pyr_redox_2
HI0933_like
DUF3237
Motif
Other DBs
NCBI-ProteinID:
QHL86897
UniProt:
A0A6P1NT54
LinkDB
All DBs
Position
complement(1273758..1275104)
Genome browser
AA seq
448 aa
AA seq
DB search
MKVAILGAGESGVGAALLAQAKGYDVFVSDKGAISDKYRAELTKAGIAFEEGEHTLDSIY
NAQEIIKSPGIPDTAPVIKGALERTIPVISEIEFAGRYADGKFICITGTNGKTTTTLLTY
HLLKSAGLKVALAGNVGESLAGKVLEGGYDYYVVELSSFQLDNMYQFKAHIGILLNITPD
HLDRYAYQMEKYAAAKFKLAQNMTAADYFLFNQDDAEIQKYKAGHEVPGTAVPFGLKEAD
GLAIRYEGQSILATFSGISAKVETANSPLIGQHNQYNSMAAVGAALLVGLTPEQIEQGLG
TFKNADHRMQPVGEIDGVTFINDSKATNVEAVWYALDGIKQPIVWVVGGKDKGNDYSTLL
PLVQEKVKAIVALGVDNSKIVAAFSATCPALVETQDVNEAVKLAKDFAEEGDVVLLSPAC
ASFDLFNNYEHRGRAFAEAVQNLKSAGI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagccattttgggagcaggagagagcggcgtaggcgcggctttgttggcacaa
gccaaaggctatgacgtgtttgtgtctgacaaaggcgccatctcagacaagtaccgcgcg
gagttgaccaaagccggcattgcctttgaagaaggggagcacacattagacagcatctac
aacgcacaggaaatcatcaaaagcccgggcattccagatacggctcctgtcatcaaaggc
gctttggaaagaaccatcccggtcatctctgagattgagtttgccggcagatacgcagat
ggtaagttcatctgcattacgggtaccaatggcaaaaccactaccacgctgttgacttac
catttgttgaaaagtgccgggttaaaagtggccttggcgggcaacgtaggcgaaagcctg
gcgggcaaagtgctggaaggcggctatgactattatgtagtggaactgagcagtttccag
ctagacaacatgtaccagttcaaagcgcacattggcattctgctcaacatcacgccagac
cacctggaccgctatgcctaccagatggaaaagtatgcggcagccaagttcaagttggca
cagaacatgacggcggcagactatttcctgttcaatcaggatgatgctgaaattcagaaa
tacaaggccggccatgaggtgccgggtacggcggttccgttcgggttgaaggaggcagat
ggcctggccatccggtatgaaggacagtcgattttggccactttttccggaatctcggca
aaagtagaaaccgccaactctcctttgattgggcagcacaaccagtataattccatggcg
gccgtaggggcagctttgctagtgggcttgacgccagagcagattgagcaggggttaggc
acctttaaaaacgcagatcatcgcatgcaacccgtgggcgaaatagacggcgttaccttc
atcaatgactccaaagccaccaatgtggaagcggtttggtacgccctggacggcatcaag
cagcctattgtgtgggtagtgggcggcaaagacaagggcaatgactactccactttgctg
ccgttggtgcaggaaaaagtgaaagccattgtggctttgggcgtggacaacagcaagata
gtagctgccttctcagccacctgcccagccttggtagaaacgcaagatgtaaacgaggcc
gtcaaattggcgaaagacttcgcggaggaaggggacgtggtattgctgtcgccggcctgc
gccagttttgacttgtttaataactatgaacaccgaggccgcgcgtttgcggaggcggtg
cagaatcttaaaagcgctgggatatga
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