Nibribacter ruber: GU926_06085
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Entry
GU926_06085 CDS
T06388
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nib
Nibribacter ruber
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nib03400
]
GU926_06085
DNA repair and recombination proteins [BR:
nib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GU926_06085
Archaeal homologous recombinant proteins
GU926_06085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_ATPase
NTPase_1
SMC_N
ABC_tran
nSTAND3
AAA_21
AAA_28
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHL87026
UniProt:
A0A6P1NT24
LinkDB
All DBs
Position
1432704..1436375
Genome browser
AA seq
1223 aa
AA seq
DB search
MKITSVRFYNLNSLQGEHFIAFHLPPLSESGLFAITGPTGAGKTTILDAITVALYGQVPR
HGREVAEIMTRHTGECWSEVEFEAEGKSYRARWSLRRSRSKAEGKLQSPVMELIDATTQE
VLESRLSETRQRIIDLCGLDFQQFLRSVMLSQGDFTRFLKASESERSELLEKLTDTRIYS
QISVAAFDKAKAEKQKLQDIEQRLQLDQLLSEEDRTALQKEVQRLKEEAQLAQKRSQQHH
QEQIWLEHLLKLQAREQTYTSQVQDAQARQEAWLPQQQKLQQHEQVQPFQSDLVRFTELN
RQYQALEETVQQLQHQVPAQEQKVAGQQALAEAAKTAHTHAQQALTTAEPTLDQVLQQDT
QIAAQEQQLEKDQHTTASLQTQVQSLASTLASQQLHEQKLLEEGKQLKAWLAAHALDKEL
AQSLPEGKSELKNLEEVHRHKAKYQKEQAGFALELEKEAKNGASAQTQLASTEQKLTEQQ
TVLLQLRQQAETVLSGQQPDALEQLCQDLPALCSQLEKQLDLSKTYVQAEESKKSLQTQV
DQLIQQVKEQRAQLAGTLAQQEQAQDKLQNLQQIVDLQRKIQEYEEARTQLQPEQPCPLC
GSQHHPFVTEHQPQTLSEAEQKVQLQLAQVKQLQTQERDQAAAVHKLELAQEHTQQQLTG
LEQQAQRLQEQFSQLNSALSMAHDIAAGEAIEKTWTARKEELTKATAALQQLRGVRTQIE
QAKQLELTLLQDKQRFEHVLENSAQKRGHLQSQLDKTMEELQDLSEQEQVVSQTLKGFFQ
TYGVPFTGSNGLDLLAQLEARKNAYAQKDAALPELRERYTQAQAELKASTASLAEKQEDL
QKRLEQVQMAQNSLQEIKMKRFGLLPEGQNPQTEKQRLQQNVQHTAHAWQAAEAVLHQEQ
KQLALLIHELTSKQKDQERTQQLLASLETEILTQAQPLGFQSLAQLQAMLLPDQEARALR
QEQESLRKTLNELAHGLQQVKEEYSTEKERHLTELTLEEIKPLLLALEEEKNQLQAQRGQ
QELKLQQDTHLREKHQLLTQQLDVQKGEADRWDKLARLIGSADGKKFSKYAQSLTLARLV
ELGNRHLHRLNDRYRILKSQDFELELQILDTYQGDAVRSVNSLSGGESFLVSLALALGLS
DLASHKAQIHSLFIDEGFGTLDAETLDIAMDALESLQASGKMIGIISHVEALKERISTQI
IVQKQAGGRSEIKVVSSAGVLMD
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
gtgaagataacgtccgtccgcttctataacctgaactcgctgcagggcgagcactttatt
gcctttcatttgccgcctttgagtgagagcgggttgtttgccataacgggtcccacgggt
gcgggcaagaccaccattctagacgccatcacggtggccctgtacggacaagtgccgcgc
catggccgtgaggtagccgaaatcatgacccgccacaccggtgagtgctggtctgaagtg
gaatttgaggctgagggtaaaagctatagggcgcgctggagccttcgtagaagccgaagc
aaggcagagggcaagctgcaaagccccgtgatggaactcattgacgccaccacccaggaa
gtgctggagagccgcctctctgagacccgccagcgcatcatagacttgtgcggcttggat
tttcagcagtttctacggtccgtcatgctcagtcagggagattttacgcgtttcctgaaa
gccagcgaaagcgagcgcagcgaactcctggaaaagctaacggatacccgcatctactct
cagatttcggtggccgcctttgacaaggcaaaagccgagaagcagaaactacaagacatt
gaacagcgccttcagctagaccagctcttgtctgaagaagaccgcacggccctgcaaaag
gaagtgcagcgcctgaaggaagaagcccaactggcccagaagcgcagccaacaacaccat
caggagcaaatctggttagagcatctgctgaaacttcaagccagggaacaaacatacacc
agccaggtacaagacgcccaggccagacaagaagcgtggctgccgcagcaacaaaagctg
cagcagcatgaacaggtacagcctttccaaagcgatttggtccgattcacagagctcaac
cgtcagtaccaggcgctggaagaaacggtgcaacagttgcagcaccaggtaccggcgcag
gaacagaaagtagcaggtcagcaggcattggccgaggctgctaagacagcacacacccac
gcccagcaggcactcactaccgctgagcccaccttagaccaggtcctgcagcaagatacc
cagatagcggcgcaggagcagcagcttgagaaagaccagcacaccaccgccagcctgcaa
acccaggttcaatccctggcatctaccctggccagccaacagctacatgaacaaaagctt
ctggaagaaggcaagcagctaaaggcctggctggccgcgcacgccctagacaaagaactg
gcccagagccttccggaaggtaaatctgagttgaagaacctggaggaggttcacaggcac
aaagccaagtaccaaaaagaacaagctggttttgccctggaactggaaaaagaggccaaa
aacggcgcctcggcccagacccagctggccagcacagaacaaaaactgacggagcaacaa
acagtactcctgcaattacggcaacaggcagaaaccgtcctgtcgggtcaacagcccgat
gccctggaacaactctgccaagacctgcctgccctctgtagccaactagaaaaacaactg
gaccttagcaaaacgtacgtgcaggcagaggaatctaaaaagagccttcagactcaggta
gaccagctgatacaacaagtaaaggagcaacgcgcgcagctggcaggcacgttggcccag
caagaacaagcccaggacaagctccagaacctgcaacagattgtagacctgcagcgcaag
atccaggagtatgaagaggctagaacccagctgcagccagaacagccttgccctttgtgc
ggctcacagcatcacccgtttgtcacagaacatcaaccccagaccctttctgaggcagag
caaaaagtacagctacagctggcgcaggtgaaacagttgcagacccaggagagagaccaa
gcggcggccgtccataaattagaactagcccaggaacatacccagcagcaactaactggc
ctagagcagcaggcacagcgcttgcaagaacagttctcacagttgaactctgccttatcc
atggcacatgatattgccgcaggcgaggcaattgaaaaaacctggacggcgcgcaaagaa
gaattgaccaaggccaccgccgccttacagcagcttaggggcgtgcgcactcagatagaa
caggccaaacagctagagctcaccctcctgcaggacaaacaacgttttgagcatgttttg
gaaaattccgcccaaaaacgaggacaccttcaaagtcagttagataaaacgatggaagag
ttgcaagacctttcagaacaggagcaggtggtttcccagaccttgaaaggattcttccag
acgtacggtgtaccgttcacaggcagcaacggcttagacttgctggcacaattagaagcc
cgcaagaacgcctatgcccagaaagatgccgctttgccagagctgagggaaagatacacc
caggcccaggccgagctgaaagccagcaccgcctccctggcagaaaaacaagaagacctt
caaaagcgcctcgagcaggttcaaatggctcagaacagcctgcaggaaatcaagatgaaa
cgttttgggttgttacctgaggggcagaatccgcagactgaaaagcagcgccttcaacaa
aacgtgcagcacaccgcccacgcctggcaggccgcagaagccgttttgcaccaggagcaa
aagcaactggccttgctcatccatgagctgacgtcaaagcaaaaagaccaggagcgcacc
cagcaattgttagcaagcttggagacagaaatcctcacccaggcccaaccgctaggtttt
caatccctggcccagctacaggccatgctgctccccgaccaagaggcccgagccctgcgc
caggagcaggaatctttgcgcaaaaccctaaacgagctagcgcacggcctgcaacaggta
aaagaagaatatagcacagagaaagaacgccacctcaccgagctgactctggaagaaata
aaaccgcttctgctggccctggaggaagagaaaaaccaattgcaggcccaaagaggacag
caggaactcaagctgcaacaagacacacatcttagagaaaagcaccagttgctcacgcag
cagctagacgtgcagaaaggcgaagctgaccgttgggacaaactggcccgccttattggg
tccgctgatgggaagaagttcagcaaatacgcgcagagcctcacgttggcgcgcctggta
gaactgggtaaccgccacctgcaccggctcaacgaccggtaccgcattctaaaaagccag
gactttgaactggaactgcagatcctggacacctaccagggagacgccgtacgctccgtc
aactccctttccgggggcgaaagctttttggtaagtctggccctggcattgggtttgtca
gatttagccagtcacaaagctcagattcactcattgtttattgatgagggcttcgggacg
ctggatgcggagacgctggacattgccatggacgctttggagagcctgcaggccagcggt
aaaatgattggcatcatctcgcacgtagaggctttgaaagaacgcatcagcacgcagatt
atagtccagaagcaggcaggcggccgaagtgaaatcaaggtggtcagcagcgccggggtt
ttgatggactaa
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