Nibribacter ruber: GU926_06435
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Entry
GU926_06435 CDS
T06388
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
nib
Nibribacter ruber
Pathway
nib00540
Lipopolysaccharide biosynthesis
nib01100
Metabolic pathways
nib01250
Biosynthesis of nucleotide sugars
Module
nib_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GU926_06435 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nib01005
]
GU926_06435 (rfaD)
Enzymes [BR:
nib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GU926_06435 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
nib01005
]
Core region
GU926_06435 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QHL87087
UniProt:
A0A6P1NTN5
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All DBs
Position
1522327..1523292
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AA seq
321 aa
AA seq
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MIVVTGAAGFIASCLVTRLNAANFNDVVVVDNFSVAKKMANLEGKKIKEYVDRNDFFDWL
EKNYEEVEFIFHLGARTDTTEMNREVLDLLNLDYSKKVWNACCEYQIPLVYASSAATYGS
GTLGYDDDENMIPLLQPLNPYGDSKNDFDKWALEQTAKPFFWTGLKFFNVYGPNEYHKGR
MASVILHAYNAIEENGSFTLFKSHNPDYKDGEQMRDFVYVKDVVEVLFWLMNHRKNSGIY
NLGSGQARTFLDLTFNTFTAMGKDINVDFRDTPEDIRDKYQYYTQANMDKLRSIGYDKSF
HTLEEGIQDYVQNYLMTNSYY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagtaaccggcgccgcaggttttattgccagctgtcttgtcacccggctcaat
gccgccaacttcaatgatgtggtggtggtggataatttctcggtggccaagaaaatggcg
aatctggaaggcaagaagataaaggagtatgtagaccgcaacgacttttttgactggctg
gagaaaaactacgaagaggtagaattcatcttccacctgggtgcgcgcaccgacactact
gagatgaaccgcgaagtgctggacctgctcaacctggactattccaaaaaagtatggaat
gcctgctgtgagtatcagattccattagtgtacgcttcctctgccgccacctatggctct
ggcactttgggctacgacgatgatgagaacatgattccgttgttacagcctctgaacccg
tacggtgattctaaaaacgattttgacaagtgggcactggagcaaaccgccaaacctttc
ttctggacgggtcttaagttctttaacgtgtacggccccaatgaataccacaaaggccgc
atggcctcagtgattctgcatgcctacaacgccatcgaggaaaacgggagcttcacactc
ttcaaatcacataacccagactacaaggatggcgaacagatgcgtgactttgtgtatgta
aaagacgtggtggaagtgctgttctggctcatgaaccatcgcaagaactcgggcatctac
aacctgggcagtgggcaggcccgcaccttcctggatttgacgttcaacaccttcactgcc
atgggcaaagacatcaacgtagatttcagagacacgcctgaggacattagagacaaatac
cagtactacacccaggccaacatggacaagctgcgctccattggttatgacaagtcgttc
catacgctggaagaaggcattcaggattatgtgcagaattatttgatgaccaacagttat
tattaa
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