Nibribacter ruber: GU926_07760
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Entry
GU926_07760 CDS
T06388
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
nib
Nibribacter ruber
Pathway
nib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GU926_07760 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nib01007
]
GU926_07760 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nib03016
]
GU926_07760 (serS)
Enzymes [BR:
nib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
GU926_07760 (serS)
Amino acid related enzymes [BR:
nib01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GU926_07760 (serS)
Transfer RNA biogenesis [BR:
nib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GU926_07760 (serS)
Prokaryotic type
GU926_07760 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NDC80_loop
SPATA1_C
Sipho_Gp157
CENP-F_leu_zip
DUF1664
CCDC158
ANAPC15
COG4_N
Motif
Other DBs
NCBI-ProteinID:
QHL87334
UniProt:
A0A6P1NY89
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All DBs
Position
1824309..1825586
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AA seq
425 aa
AA seq
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MLQIPVLRENTAHVLAGLEKRNFKNAAQEIQSILDVDQKRRTLQTERDELLSRANSLAKE
IGGLMKNGQKDQAEQLKAETADLKLKTKALDEEVQQLENDLQQALYKIPNVPHESVPAGK
SSEDNEVVLEHGAIPNLPENAQPHWELIKQYDIIDFDLGNKITGAGFPVYKGQGARLQRA
LINFFLDEAIKAGYDEVQPPILVNEASGIATGQLPDKEGQMYHDKADNLYLIPTAEVPIT
NLYRDEIIAEGKLPIKNVGYTPCFRREAGSWGADVRGLNRLHQFDKVEIVQIQAPEKSYE
ALEEMSQHIQGLLQKLELPYRVLRLCGGDMGFTSALTYDMEVYSAAQGRWLEVSSCSNFE
TYQANRLKLRQRTEGGKPQLLHTLNGSALALPRIVAALLENNQTPEGIKLPKVLHSYLGF
EMITK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaatacccgttttacgcgagaacaccgcccacgtccttgccggtctggagaag
agaaactttaagaacgccgcccaagaaatacagtctatcctagacgtagaccagaagcgc
cgcacgttgcagacagaacgagacgagctcttgtcccgcgccaactctctggccaaggag
attggcggcctcatgaaaaacggacaaaaagaccaagccgaacaactcaaagccgagact
gccgacctgaagctgaaaaccaaagccctggacgaagaagtacagcaactggagaacgac
ctacagcaggccctctacaaaatcccgaacgtgccgcatgaaagcgtgcccgccggaaag
tcttctgaagacaatgaagtggttctagaacatggcgctatccctaacctgccagagaat
gctcagccacactgggaactaatcaagcagtatgacatcattgactttgacctgggcaac
aaaatcaccggcgctggttttcccgtgtacaaaggccagggcgcccgtctgcagcgcgcc
ttgattaacttcttcttagacgaagccatcaaagccggctatgatgaggtacaaccacct
atcctggtaaatgaagcctctggcattgccaccggccagctccccgacaaagaaggccag
atgtaccatgacaaagccgacaacctgtatttaattcctacggccgaggttcctatcacc
aacctttaccgtgacgagatcattgccgaagggaaactgcctatcaaaaacgtgggctac
acgccctgctttagaagagaggctggttcctggggcgccgatgtgcgcggcctgaaccgt
ttgcatcagtttgacaaagtagagattgtacagatacaagccccagaaaagtcatatgaa
gccctggaggaaatgagccagcacatacaaggcttgttgcagaaactagagctaccgtat
cgcgtgctacgtctttgtggtggcgacatgggcttcacctctgccctcacctatgatatg
gaagtctactctgccgcgcaaggccgctggttagaagtaagttcttgctctaactttgag
acctaccaggccaaccgcttaaaactgcgccaacgcaccgaaggcggcaaaccgcagttg
ttacataccttaaacggaagcgccctggccctaccccgtattgtggccgccctgctagag
aacaaccaaacgccagaaggcatcaaattaccgaaggtcttgcattcctatctgggcttc
gagatgattaccaagtag
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