Nibribacter ruber: GU926_08050
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Entry
GU926_08050 CDS
T06388
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
nib
Nibribacter ruber
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nib02000
]
GU926_08050
Transporters [BR:
nib02000
]
Other transporters
Pores ion channels [TC:
1
]
GU926_08050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
QHL87388
UniProt:
A0A6P1NZH2
LinkDB
All DBs
Position
1900246..1903326
Genome browser
AA seq
1026 aa
AA seq
DB search
MKKNLLFFLLFHLCGIAFAQTTITGRVTSAAGGEPLPGVSVVIKGTTNGTSTDAEGRYQI
QAPGTGGTLVFSYIGFVSKEEAINGRTTINMGLQEDARALQEVVVVGYGTQLRREVSTAI
SSVSTEEITQTPVTRIEQALQGRVAGVQATNISGQPGDAPTIRIRGIGSTGNSNPIYIVD
GFPVGGIDYLNPGDIEKIDILKDAASAAIYGARGGNGVVIITTKQGKRDGKMTVSYDGYY
GVQNPWRRLELLNGREYATLMNEGAANAGLTPPFTDPSQYGEGTDWQDAIFEKNAPIQNH
QLTINGGSEKSGYSAAFSYFDQDGIVGGDKSNFQRYTARINADNQVKSFLKIGTNLAYTH
IKRRSFDANQEFGGILSNAINMDPLTPVFETDPAKLAQSQYTLNPVVRDGNGNVFAISPY
ASQEIVNPLARLQVMNGLTNVDKFVGNAMAELKLLDGLTFHSTLGIDLAFVVGSNYNPIF
YLNAAQYNPNSLVSRSTDRYYTWQAENYATYKKGFGEHNLEVTVGTSALKDRGEGLFGSN
TGLVTSDPTMAYLNLAVNAGTAVAQGGAYEHAILSFFGRANYNYKGKYLLSATVRRDGSS
RFGRDNRFATFPSFSAGWVLSDESFFPETNTISLAKLRASWGQNGNEQIGGPYPWAAQIG
VGRGYTFYNPGAKGYTSGAGAVAIANTELGWEASEQTNIGLDLNFFNNALTFTTDYYIKT
TKGLLVIAPIPATPGENPGPINGGNVKNQGVEMALGYQGNVGGLGYNFSLNGTYNKNEVT
EISNPEGLLGQVNISTYGPANRTAVGLPVGAFYGYKTAGIFQNQTQVDAQELQPDAVPGD
VIFVDVNKDGKFDTNDRTYLGNPTPKFTTGFNMGFDFKNFDISAFFYGAFGHKIFNGTRR
YDLVYSNTQSRALNRWTGENSTNEFPRFTFNDTNGNYKNISDLYIEDGDFVRLKTLQLGY
NLPGTLLTKIHMQKLRVYVSADNLITLTDYSGFDPEIGARGAIDIGIDRGVYPQAKTFRL
GFNATF
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatctactttttttcctcttattccatttgtgtgggattgcctttgcgcag
accactatcactggacgcgtcacctctgcggcgggcggtgagccattgcctggagtaagt
gtggtgatcaaaggcactaccaacggcacctctaccgatgcagagggacgctatcagatt
caagcacctggcacaggcggcaccttagtcttctcttacataggatttgtctccaaagaa
gaagccatcaatggaagaactactatcaacatgggcttacaggaagacgccagagccttg
caagaagtagtggtggtagggtatggcactcagttacgaagagaagtgtcaacggctatc
tcctctgtttctacggaagaaatcactcaaacccctgtaaccagaatagagcaggcccta
caaggtcgcgtagccggtgtgcaggccaccaacatttctggtcagcccggcgatgcacca
accatcagaataagggggattggttcaacgggtaattctaaccccatctatatagtagat
ggattcccggtgggtggcattgactatttgaaccccggtgatattgagaaaatagacatt
ttaaaggatgcggcttcggcagccatctatggagccagaggcggaaacggggtggtgatc
atcaccaccaagcaaggcaagagagacggcaagatgacggtttcttatgacggctattac
ggcgttcagaacccttggaggagattagagctgttgaacgggcgtgaatacgctactttg
atgaatgaaggtgccgctaacgcaggccttacgcctcctttcacagacccaagccagtac
ggtgaaggcacagactggcaggacgccatcttcgaaaaaaacgctcccatccaaaaccac
caattaaccatcaatggcggtagcgagaagtctggctactcagcggctttctcttatttt
gaccaagacggcattgtgggcggtgacaagtccaacttccagcgctacactgctagaatt
aacgcagacaaccaggtaaagagcttcctgaaaattggtactaatctggcatacacccac
attaagagacggtcttttgatgccaaccaggagtttggcggtattctgagcaatgccatc
aatatggacccgctcacgcctgtgtttgaaaccgatccggccaagttggcacagagtcag
tacaccttaaacccggtggtaagagacggaaacggaaacgtgtttgccatttctccttat
gcctcacaagaaattgtgaacccattggcccgcctgcaggtcatgaacggacttaccaac
gtagacaaatttgtaggtaacgccatggctgaattaaaactgctggacggtcttaccttc
cattctacgttgggcattgacctggcctttgtggtaggcagcaactacaatcccatcttc
tatttgaatgcagctcagtacaaccctaattcactagtatccagaagcacggacaggtac
tacacatggcaggctgaaaactatgctacctacaaaaaaggctttggagagcataaccta
gaagtaacagttggtacatctgccttgaaggaccgtggagaaggtttgtttggctcaaac
actgggttagttaccagtgatcctaccatggcttatctcaacctggcggtaaatgcgggt
acggccgtagcacaaggtggtgcctatgagcatgctatcctctctttctttggaagagcc
aattacaactacaaggggaaataccttttatctgccacggttagaagagatggctcttcc
agatttggtagagacaatagatttgccactttcccttcgttctcagcgggctgggtactg
tcagatgaatctttctttccagagaccaacaccatttctcttgctaaacttcgtgcttct
tggggacaaaatgggaatgaacaaattggaggcccttacccttgggcggcgcagattggt
gtaggcagaggttacactttctataatccaggtgccaaaggctataccagcggtgctggg
gctgtggccatagccaacacagagctaggttgggaagcctctgagcaaaccaatattggt
ttagacctaaacttcttcaacaacgcattaacctttaccacagactattatatcaaaact
actaaagggcttttagtcattgctcccattccagctaccccaggagagaatccgggtcca
atcaatggtgggaatgtaaaaaaccaaggagtagagatggcgcttggctaccaaggtaat
gtgggtgggcttggctataacttctccctaaacggtacctacaacaagaatgaggttacc
gaaatcagcaatccagaagggttgttagggcaagtaaacatctcaacctatggtcctgct
aacaggacagcagttggcttaccggtaggtgccttctatgggtacaagaccgccggcatc
ttccagaaccaaacgcaggtagacgcacaagaattgcaaccagacgcagtacctggcgat
gtgatctttgtggatgtgaacaaggacggcaagtttgacactaatgaccgtacatatttg
ggcaatcctacccctaagttcaccactggctttaacatgggttttgatttcaagaatttt
gacatcagtgccttcttctacggagcctttggtcataaaatctttaacggcacccgccgc
tatgacttggtgtactccaatactcagtcaagagcgcttaaccgctggaccggtgaaaac
agcaccaatgagttcccaagattcacctttaatgacacgaacggcaactataagaacatc
tctgacttgtatatagaggacggggacttcgtgcgcttgaagactttacaattaggctac
aacctgccagggacgcttttaaccaagatacacatgcagaaactgcgcgtgtatgtgtca
gcagacaatttgatcacgctcacagactattctggttttgaccctgaaattggtgcccgt
ggcgccattgacataggaattgacagaggcgtgtatccgcaggccaaaacattcagatta
ggttttaatgccactttctaa
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