Nibribacter ruber: GU926_09040
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Entry
GU926_09040 CDS
T06388
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
nib
Nibribacter ruber
Pathway
nib00020
Citrate cycle (TCA cycle)
nib00640
Propanoate metabolism
nib00720
Other carbon fixation pathways
nib01100
Metabolic pathways
nib01110
Biosynthesis of secondary metabolites
nib01120
Microbial metabolism in diverse environments
nib01200
Carbon metabolism
Module
nib_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nib_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GU926_09040 (sucD)
00640 Propanoate metabolism
GU926_09040 (sucD)
00660 C5-Branched dibasic acid metabolism
GU926_09040 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
GU926_09040 (sucD)
Enzymes [BR:
nib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
GU926_09040 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
QHL87575
UniProt:
A0A6P1NZI6
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All DBs
Position
complement(2131464..2132354)
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AA seq
296 aa
AA seq
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MSVLVNKDSKVIVQGFTGSEGSFHAQQMIEYGTNVVGGVTPGKGGSTHLDRPVFNTVAEA
VQKAQANVSIIFVPPAFAADAIMEAADAGIAVIVCITEGIPVKDMVAAKNYIKNKAVTLI
GPNCPGVITPGEAKVGIMPGFVFKPGRIGIVSKSGTLTYEAADQIVKAGLGISTAIGIGG
DPIIGTPTKNAVELLMEDPETDAIVMIGEIGGNYEAMAAEYIRSTGNKKPVVGFIAGQTA
PAGRRMGHAGAIIGGADDTAAAKMRIMRENGIFVVDSPAEIGDTMLKALKGEATNA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttttagtaaataaagattccaaggtgattgtgcagggcttcaccggctcagaa
ggttctttccacgcacagcagatgattgagtatggtaccaacgtagttggtggcgtaacc
ccgggcaaaggcggttctacccacttagaccgtccggtatttaacaccgtggccgaggcc
gtgcagaaagcgcaagccaacgtgtctatcattttcgtgccgccggcttttgctgctgac
gccatcatggaagccgccgatgctggtattgcagtgattgtttgtatcacggaaggtatt
ccagtgaaagacatggttgccgctaaaaactacatcaaaaacaaagcggttactcttatc
ggaccaaactgtccaggtgtgatcaccccaggcgaggcgaaggttggtatcatgccaggt
ttcgtgttcaagccaggtagaattggcattgtgtctaaatctggtaccttgacctatgag
gccgcagaccaaatcgtgaaggctggcttgggtatctctaccgctatcgggattggtggt
gaccccatcattggaacgcctactaaaaacgccgtggagttgttgatggaagatccagag
actgacgctattgtaatgattggtgagattggtggtaactatgaggccatggccgctgag
tacatccgctccactggtaacaaaaagccagtggttggtttcatcgcaggccagacggct
cctgctggtcgtagaatgggccacgctggtgccatcattggtggtgctgatgatacggct
gctgctaaaatgcgcatcatgcgtgagaacggcatcttcgtagtggattctcccgcagag
atcggtgacactatgttgaaagcattgaaaggcgaagcgaccaacgcataa
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