Nibribacter ruber: GU926_10445
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Entry
GU926_10445 CDS
T06388
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
nib
Nibribacter ruber
Pathway
nib00260
Glycine, serine and threonine metabolism
nib00630
Glyoxylate and dicarboxylate metabolism
nib00670
One carbon pool by folate
nib00785
Lipoic acid metabolism
nib01100
Metabolic pathways
nib01110
Biosynthesis of secondary metabolites
nib01200
Carbon metabolism
Module
nib_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GU926_10445 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GU926_10445 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GU926_10445 (gcvP)
00670 One carbon pool by folate
GU926_10445 (gcvP)
Enzymes [BR:
nib01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
GU926_10445 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QHL87825
UniProt:
A0A6P1NZZ7
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Position
2486897..2489815
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AA seq
972 aa
AA seq
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MIFKTKPADIFKERHNGPVKEQIQEMLQAIGADSLDQLIDETVPAAIRLKQPLNLPSALT
ERDFLRKFSKIAKQNKLYKSYIGLGYNDTILPPVIQRNILENPGWYTAYTPYQAEIAQGR
LEALINYQTLVIELTGVEIANASLLDEATAAAEAMNMLYALRKGSRKNATRFFVSEQVLP
QTLDVLITRATPLNIELIVGDHLDVNLEDDTIFGALVQYPAANGEVFDYTDFISQAHAQD
MLVAVAADLMSLTLLKAPGEMGADVVVGSSQRFGVPMGYGGPHAGFFATKEEYKRSIPGR
IIGVSVDAYGNKAYRMALQTREQHIRREKATSNICTAQVLLAVMAGMYAVYHGPRRLKYI
GLNIHSLAQILEKGLERLGFEQINDNYFDTLQIRVESTELQSAIKQESETSEINFRYFAD
SHNVGISLNENTDLEDVKAILAVFSKVAGKPTAELEMTELPEQVDIQWPESLIRTSSYLQ
HEVFNKYHSESEILRYMKYLENKDFSLTHGMIPLGSCTMKLNATAEMIPVTWPEIGSLHP
FAPADQAKGYAQIFKDLEAWLCEVTGFAAVSLQPNSGAQGEYAGLMVIRAYHEARGDHHR
NISLIPSSAHGTNPASAVMAGMKVVIVKCDERGNIDVADLKAKAEQHKDDLSCLMVTYPS
THGVYEESILEICETIHNYGGRVYMDGANMNAQVGLTSPGNIGADVCHLNLHKTFCIPHG
GGGPGVGPIGVVADLAPYLPGHAVVDLGRPEAINAVSAAPWGSASILPISYAYIAMMGGE
GLTEATKIAILNANYIKARLEPHYPVLYVGTNGRCAHEMILDCRAFKKVGVEVEDIAKRL
MDYGFHAPTVSFPVAGTLMVEPTESESKAELDRFCEAMIAIRAEITEVEEGKADQKVNVL
KNAPHPAHIALAENWTMPYSREKAVYPVPYTRVAKFWPTVSRVDSAYGDRNLICSCAPVE
AYNEQDQPMTAV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgatatttaagaccaaacctgcagacattttcaaagaacgccacaacggacctgtcaaa
gaacagatacaggaaatgttgcaagccattggcgcagattctttggaccagctcattgat
gagaccgtgcctgctgccattagattaaaacaaccgttgaacttgccctctgccttaacg
gagcgcgacttcttgcgcaagttctctaagattgccaagcagaacaagctgtacaagtct
tacattggcttgggctataatgacaccattttgccaccggtcatccagcggaacattctg
gagaacccaggctggtacaccgcttacacgccgtaccaagccgagattgcccaaggtcgt
ctagaagccttgatcaactaccagaccctggtgattgaactgaccggcgtagagattgcc
aacgcgtctttgctggatgaggctaccgccgctgctgaggccatgaacatgctgtacgcg
ctacgcaaaggctccagaaagaacgccacccgcttctttgtctctgagcaggtattgccg
cagaccttggacgtgttgattacgcgtgccacgcctttgaacattgaactgattgtaggc
gatcacctggacgtgaacttggaggatgacaccatcttcggggcgctggtgcagtacccg
gccgccaacggtgaggtgtttgactacacagacttcatctctcaggcgcacgcccaagac
atgctggtggccgtggccgctgacttgatgagcttgaccttattgaaagcccccggcgaa
atgggcgctgacgtagtggtaggttcttcgcagcgttttggcgtaccaatgggctatggc
ggaccgcacgccggtttcttcgctaccaaagaagaatacaagcgctccatcccgggccgt
atcattggggtttctgtagacgcctatggtaacaaagcctatcgtatggccttgcagacc
cgtgagcagcacattagaagagagaaagccacgtctaacatctgtactgcgcaggtatta
ttggccgtgatggctggtatgtacgccgtgtaccatggaccgcgtcgcttgaaatacatt
ggtctgaacatccacagcctagcccagatcttggagaaaggtctagagcgtctgggcttt
gagcaaatcaatgacaactattttgacactcttcagattagagtagagagcactgagttg
caatctgccatcaagcaagagtctgagacttctgagatcaacttccgttacttcgcagac
tctcataatgtaggcatctccttgaatgaaaacactgacctagaggatgtaaaagcgatt
ttggctgttttctcaaaagtagccggaaaaccaaccgctgagttggaaatgaccgaattg
cctgagcaagtggacatccagtggccagagtcattgatcagaacgtcttcttacctacag
catgaagtgttcaacaagtaccactcagaaagcgagattcttcgctacatgaagtactta
gaaaacaaagacttctctttgacgcacggcatgattccgttgggttcttgcaccatgaaa
ctgaacgccaccgctgagatgattccggtgacctggccagagattggttctttgcaccca
tttgccccagcagaccaagcgaaaggctacgctcaaatcttcaaagacctggaagcatgg
ctatgcgaagtgactggttttgctgctgtttctctgcaacctaactcaggtgcccaaggt
gagtacgccggtttgatggtgattagagcataccatgaggctagaggtgatcatcaccgt
aacatctccctaattccttcatcagcccacggcaccaatccagcttctgcggtaatggcc
ggcatgaaagtggtaattgtgaagtgcgatgagcgcggtaacattgacgtagccgacctg
aaagccaaagccgagcagcacaaagacgacttgtcttgcctaatggtaacctatccttct
acccacggcgtgtatgaggaaagcatcttagaaatctgcgaaaccatccataattacggt
ggccgtgtgtacatggacggtgccaacatgaacgctcaggttggcttgacctcgccgggc
aacatcggtgcggacgtgtgccacttgaacctgcacaaaaccttctgtattcctcacggt
ggtggtggaccaggcgttggcccaattggcgtagttgctgacttggctccttacttgcca
ggtcacgcagtggtagatttgggtagaccagaagccatcaatgccgtttctgccgctcct
tggggtagcgccagcattctgccaatctcttacgcctacatcgccatgatgggtggtgaa
ggtttgacagaagctaccaagattgccatcctgaatgccaactacatcaaagcccgctta
gagccgcactaccctgtgttgtacgttggtaccaacggccgttgcgcccacgagatgatc
ttagactgccgcgccttcaagaaagtaggcgtagaggtagaagacattgccaagcgtttg
atggactacggtttccatgcgccaacggtatctttcccagtggcaggcaccttgatggta
gagcccacagaaagcgaaagcaaagccgagctggatcgtttctgcgaagccatgattgcc
atcagagcagagatcacggaggtagaagaaggcaaagccgaccagaaagtgaacgtgttg
aaaaacgcgcctcacccagcccacattgccctagccgagaactggaccatgccgtactca
agagagaaagcagtgtacccagtgccatacaccagagttgccaagttctggccaaccgtg
agccgcgtagacagcgcctacggtgaccgtaacttgatttgtagctgcgctccggtagaa
gcttacaatgagcaagaccagccaatgacggcggtgtaa
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