Nibribacter ruber: GU926_11605
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Entry
GU926_11605 CDS
T06388
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nib
Nibribacter ruber
Pathway
nib03030
DNA replication
nib03410
Base excision repair
nib03420
Nucleotide excision repair
nib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GU926_11605 (polA)
03410 Base excision repair
GU926_11605 (polA)
03420 Nucleotide excision repair
GU926_11605 (polA)
03440 Homologous recombination
GU926_11605 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nib03032
]
GU926_11605 (polA)
03400 DNA repair and recombination proteins [BR:
nib03400
]
GU926_11605 (polA)
Enzymes [BR:
nib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GU926_11605 (polA)
DNA replication proteins [BR:
nib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GU926_11605 (polA)
DNA repair and recombination proteins [BR:
nib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GU926_11605 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GU926_11605 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QHL88041
UniProt:
A0A6P1P0V9
LinkDB
All DBs
Position
complement(2763875..2766745)
Genome browser
AA seq
956 aa
AA seq
DB search
MSTPDKRLFLLDAMALIYRAHFAFSKNPRINSKGMNTGAALGFTNTLVDLLNREKPTHIG
VCYDAPSKTFRHDNFVEYKANRQAMPEDISIAIPYVKKIVEAFGIPGMMLDGFEADDIIG
TLSCKAEKAGFDVFMMTPDKDYYQLVTDHVFVYKPAFLGNAIEVIDKPKVLERWEISDVK
QVIDILGLQGDAVDNIPGIPGIGEKTAKTLIQKYGSVENLIAHSHELKGKQKENVENFAE
QGLMSKELATIHLDVPIDFDEEGLRYDGPDMDKLAALFDELEFRQLATRVLGTASPAVPK
PISNKPTVGKGFKSDKPMGQTSLFDMPADEVMTPEAGAMIEGGGEGYVSTPRKTIDTTLH
EYHLLTMPEQRAQLLKYLKLQKEISFDTETTSIDAITARLVGISFCYMPGEAYYIPVPAD
DYEATLEIVQEFKEILESPSITKIGQNIKYDLVVLQRYGIDVQGPLYDTMLAHYLLEPDM
RHNMDLLAETYLHYTPIAIETLLGKGKNQLTMDKLPPLQIYEYACEDADVTLQLKHYFDP
LLEKQGLKRLFNDVENPLLRVLGHMEREGVSIDAEALGESSIVLQTSIKEIEQKIFEQAG
MEFNIGSPKQLGEVLFDRMQLGGNKIKKTKTGQYATGEEILSKLAFEHEIVALILDHRQL
TKLKSTYVDALPQLICKEDDRLHTSYNQAVAATGRLSSTNPNLQNIPIRTEKGREIRKAF
VPRDENHVLLSADYSQIELRIMAHFSNDATMKEAFQKGLDIHASTAAKVFHVPVDQVDSD
MRRKAKTINFGIIYGISAFGLAERLAIPRREAAEIIEAYFQEFPAVKQYMDSAINEARDQ
EFVETLLGRRRYLRDINSRNQNIRGYAERNAINAPIQGTAADIIKIAMINIDQWLRDEKL
ASRMILQVHDELVFDVLKEELSLVQAKVEELMKNAFPLSVPMEVGMGTGDNWLQAH
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaccagacaaacgcctttttctcttagacgccatggcgctcatctaccgcgcc
cacttcgcgttcagcaagaaccccagaatcaactccaagggcatgaacaccggcgctgcg
ctgggcttcaccaacaccttggtagacctgctcaaccgcgaaaagcccacccacattggg
gtttgctatgacgcgccatccaagacgttccggcatgacaactttgtagagtacaaggcc
aataggcaggccatgcccgaggatatttccattgccataccgtacgtgaagaagattgtg
gaggcctttggcataccgggcatgatgctggacggttttgaggccgatgacatcattggc
acgctttcctgtaaggcagaaaaggctgggtttgacgtgttcatgatgacgccagacaag
gactattaccagctggtcactgatcatgtgtttgtctacaagccggcattcttaggcaat
gccattgaggtcattgacaaacccaaagtgctggagcgctgggaaatcagtgatgtaaaa
caagtcattgacattctaggcttgcagggcgatgccgtggacaacatcccgggcataccg
ggcattggcgagaagacggccaagacgcttattcaaaaatacggctcggtagagaatcta
atcgcccattcgcatgaactgaaaggcaagcagaaggagaacgtggagaacttcgctgag
cagggcttgatgtccaaagaattggccaccattcacctggacgtacccattgactttgac
gaggaaggcctgcgctatgacggccccgacatggacaagctggccgccctctttgacgag
ctggagttcagacaactggctacgcgtgtgctgggtaccgcctcgccggccgttcccaag
cccatctccaacaaacccaccgtaggcaaaggctttaagtcagacaagcccatggggcag
acgtctctctttgacatgcccgctgatgaggtcatgacgcctgaggcaggggctatgata
gaaggcggcggtgaaggttatgtgtctacgccacgcaaaaccattgacaccacgctacat
gagtaccatctgctcaccatgccagagcagcgtgcgcaactgttaaaatacctgaagctt
cagaaggaaatttcttttgacaccgagaccaccagcattgacgccatcaccgcgcgcctg
gtgggcatctcgttctgctacatgcccggcgaggcgtattacattccagtgccagctgat
gactatgaggctactctggagattgtgcaggagttcaaggagatattggaaagcccttct
attaccaagattggccagaacatcaagtatgacttggtagtcttgcagcgctacggcatt
gacgtgcaaggcccactgtatgataccatgctggcccactacctcctagagccagacatg
cgccacaacatggatttgctggcagagacgtatttacattacacacccatcgcgattgag
acgctgttaggcaaaggcaagaaccagctgaccatggacaagttgccgccgctccaaatc
tatgaatacgcctgcgaggatgctgacgtcacgctacagcttaagcattactttgacccg
ttgctggagaaacagggccttaagcgtctcttcaatgacgtagagaacccactattgcgc
gtgctggggcacatggagcgcgaaggcgtgagcattgacgccgaagctctgggtgagtct
tctatcgtgttgcaaaccagtatcaaggaaattgaacagaagatttttgagcaagcgggc
atggagttcaacatcggctcacctaagcaattgggcgaagtcctgtttgaccgcatgcag
ctgggcggcaacaaaattaagaaaaccaaaacgggccaatatgccaccggcgaggagata
ctgtctaagctggcctttgagcatgagattgtcgcgttgatcctagaccatagacaactg
accaagctcaagagcacctacgtagacgcgcttccgcaattgatttgcaaagaggatgac
cgcctgcacacgtcctataaccaagccgtagccgctaccggccgtttgagttctaccaac
cccaacctgcagaacattcctattaggactgagaaagggcgtgagatacgcaaagccttc
gtgccgagagatgaaaaccacgtattgctgtccgcggattattcgcagattgagttgagg
atcatggcgcatttcagcaatgacgccactatgaaagaggccttccagaagggtttggat
attcacgcgtcaacggcggccaaggtgttccacgtgcccgttgaccaggtggacagtgat
atgcgccgcaaggccaagaccatcaacttcgggattatctatgggatttctgcgtttggt
ctggccgagagattggctattccaagaagagaggctgctgaaattattgaagcctacttc
caggagttcccagcggtgaagcagtacatggacagcgccatcaacgaggcccgcgaccag
gagtttgtggagacgctgttaggccgtagacgctacctcagggacattaactcccgcaac
cagaacatacggggctacgccgaacgcaacgccatcaacgcgcccatccaaggcacggcg
gcagacatcatcaagattgccatgatcaacattgaccaatggctacgggatgagaaactg
gctagccgcatgatcttgcaggtgcatgatgaattggtgtttgacgtgctcaaagaagaa
ctgtcactggtgcaggccaaagtagaggaactcatgaaaaacgccttcccgctgagcgtt
cccatggaagtaggcatgggcaccggtgataactggctgcaggcgcactag
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