Nibribacter ruber: GU926_12400
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Entry
GU926_12400 CDS
T06388
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
nib
Nibribacter ruber
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nib03009
]
GU926_12400
Enzymes [BR:
nib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
GU926_12400
Ribosome biogenesis [BR:
nib03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GU926_12400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QHL88188
UniProt:
A0A6P1P123
LinkDB
All DBs
Position
2944537..2946339
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AA seq
600 aa
AA seq
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MARREDTPQEGRDRDRNAGNGERKVFGRGTRFDRPAGGDRDRGPRRDNNDSRSSDRGDRA
ERPQREHKDDYSGYEASSRRDDRERAPRRENDRRGGDFRPVERNNDRRSERPSFSGDRDR
APRREEDRGGFKRPGSSDRNERGGYARGGEDRNREGGFRKPGSSFGGDRDNRSSRGGDER
RSFGSSEGRDDRRGGFRPTTGDDRRGGGDRDNRGFNRGGDRNREGGFTPTEGKKRYAPNP
HPSRGAEGREDRPGRSAEGREERPRRNEDRPQRDDSRPKRAFEIDNPDRASKFSRSDRGD
RPSFSRGGDRPSFQKRDDRRSNDRNDKPRTASRYDRSNEEVQDAPSYNLKHYEDRKKRKQ
QDTEDDGIRLNRYIANAGICSRREADELIAAGEIKVNGEVVIEMGYKVAPTDTVQYGRKT
LNREKTVYVLLNKPKDFITTTEDPEGRKTVMDLVKNASKERLFPVGRLDRNTTGLLLFTN
DGELAQKLTHPSHKVTKIYQVELDKPITKDDLAKIADGLELEDGKADVDDVALLGDSNKF
LGIEIHIGRNRIVRRIFEHLGYEVVSLDRVQYAGLTKKDLPRGDWRFLSEKEVVRLKYFM
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctagaagagaagacacgccccaagaaggcagagacagagaccgtaacgcagggaac
ggtgaaagaaaagtatttggccgtggcacccgctttgaccgcccagccggcggtgacaga
gacagaggtccgcgcagagataataatgacagccgctcttcagacagaggagaccgcgct
gaacgcccccaaagagaacacaaagacgactatagcggctatgaggccagctctagaaga
gatgacagagaaagagcgccgcgccgcgagaatgatcgccggggcggtgacttccgtccg
gtagaacgcaacaacgaccgccgctcagaaagaccatctttcagtggagaccgtgaccgc
gctccaagacgcgaagaggacagaggcgggttcaaacgccctggctcatcagacagaaac
gaaagaggtggctacgcaagaggcggggaagaccgtaaccgcgagggcggcttccggaaa
cctggttcctcctttggcggcgacagagacaatcgttcttccagaggcggtgatgaaaga
cgcagcttcggcagctctgaaggcagagatgacagaagaggcggctttagaccaaccacc
ggcgatgaccgtagaggcggtggtgacagagacaaccgtggcttcaaccgcggcggtgac
cgcaaccgtgaaggtggctttacccccactgaaggcaagaaaagatacgcccctaaccct
cacccaagcagaggagcagaaggccgggaagaccgtccaggcagaagcgcagaaggtaga
gaggagcgtccgcgcagaaacgaagacagaccgcagcgcgatgacagcagaccaaagcgt
gcatttgagatagacaatccagaccgcgcgtctaaattctctcgttcagacagaggcgac
aggccttctttctccagagggggtgaccgtccttcgttccagaagcgtgatgaccgcagg
agcaatgaccgcaatgataaaccccgcaccgctagtcgctatgaccgcagcaatgaagaa
gtgcaggacgcgccgtcttacaacctaaagcactacgaagaccgcaaaaagcgcaagcag
caggacacagaggatgacggcatccgcttgaaccgctacatcgccaatgcgggcatctgc
tctcgcagagaggcagatgagcttattgcggccggtgaaatcaaagtaaacggtgaagtg
gtgatagagatgggctacaaagtggcgcctacagacaccgtgcaatacggccgcaagacc
ttgaaccgcgaaaaaacggtatacgtgctgttgaacaagccaaaagacttcatcactacc
acagaagatccagaaggccgcaaaacggtgatggacctggtgaagaatgcgtcaaaagag
cgcttgttcccagtgggtagactagacagaaacaccaccggcctgttgctgttcaccaat
gacggagaactggcgcagaaacttacgcacccgtcacacaaagtcactaaaatctaccag
gtagaactggacaagcccatcaccaaggatgacctggccaagatagccgatggcttagaa
ctggaagacggcaaagccgatgtggatgatgtggccttgctgggcgactctaacaagttc
ctgggcattgagattcatattggccgcaaccgcattgtgcgccgtatttttgaacacctg
ggctatgaggtagtgtctctggaccgcgtacaatatgccggccttaccaagaaagacctg
ccaagaggcgactggagattcctttcagaaaaagaagtagtgcgcttgaaatactttatg
taa
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