Nibribacter ruber: GU926_13110
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Entry
GU926_13110 CDS
T06388
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
nib
Nibribacter ruber
Pathway
nib00521
Streptomycin biosynthesis
nib00523
Polyketide sugar unit biosynthesis
nib00525
Acarbose and validamycin biosynthesis
nib00541
Biosynthesis of various nucleotide sugars
nib01100
Metabolic pathways
nib01110
Biosynthesis of secondary metabolites
nib01250
Biosynthesis of nucleotide sugars
Module
nib_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GU926_13110 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GU926_13110 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GU926_13110 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GU926_13110 (rfbB)
00525 Acarbose and validamycin biosynthesis
GU926_13110 (rfbB)
Enzymes [BR:
nib01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GU926_13110 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
NAD_binding_10
KR
DUF4942
Motif
Other DBs
NCBI-ProteinID:
QHL88321
UniProt:
A0A6P1P1A6
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Position
3106670..3107716
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AA seq
348 aa
AA seq
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MKILITGGAGFIGSHVVRLFVNKYPNYQIFNLDKLTYAGNLQNLTDIENAPNYTFIKGDI
TDQEYINSLFQEHQFDAVMHLAAESHVDRSITDPMAFVRTNVNGTCNLLHAAKELWKSDF
TNHIFYHISTDEVYGSLGEEGMFTEETKYDPRSPYSASKASSDHFVRAYYHTYGLPVKIS
NCSNNYGPNHFPEKLIPLALNNIKNMKPVPVYGKGENIRDWLYVIDHARAIDDVFHKGVV
GETYNIGGVNEWRNIDLIHLLCDIMDQKLNREPGTSRGLITFVTDRAGHDLRYAIDSSKI
MKELGWAPSVTFEEGLEKTVDWYLQNEEWLTNVTSGNYQDYYQEQYNR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattaatcacaggaggcgcgggatttattggctcacacgtagtgaggctgttc
gttaataaataccccaactaccaaatcttcaacctggacaagctgacgtacgctggtaac
ctgcagaatctgacggatattgagaatgcccctaactatacgtttatcaaaggcgacatc
acggatcaggaatacatcaacagcctgttccaagagcatcagtttgatgccgtgatgcac
ctggcggcagagtcgcatgtggataggtctatcacagaccccatggcctttgtgcgcact
aacgtaaacggtacctgtaacctattgcacgccgccaaagaactgtggaagtctgatttc
acgaaccacatcttctaccatatttctactgacgaggtatatggctcattaggcgaagaa
ggtatgttcacggaagagaccaagtatgaccctcgttcaccgtattctgcttctaaagca
agttcagaccattttgtgagggcgtattaccatacctatggccttccggttaaaatttct
aactgctccaataattacggccccaatcattttcctgagaagctgattccattggcgctc
aataatatcaagaatatgaaacccgtgccggtgtatggcaaaggagagaacatcagagat
tggttgtacgtgattgatcacgcccgcgccattgatgatgtgtttcataaaggcgtggta
ggcgagacctataacatcggaggcgtgaacgaatggcgcaatattgacctcattcacctg
ctctgcgacatcatggaccagaaattgaaccgtgagccgggcacctcgcgcgggcttatc
acattcgtgacagacagagccggccatgacctgcgttatgccattgattcatccaaaatc
atgaaggagctaggctgggcaccgtccgtgacatttgaagaaggtctggagaagaccgtg
gactggtacttgcagaatgaagagtggttgaccaacgtaacttcaggcaattatcaggat
tactaccaggaacaatataaccgttaa
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