KEGG   Nibribacter ruber: GU926_14190
Entry
GU926_14190       CDS       T06388                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
nib  Nibribacter ruber
Pathway
nib03030  DNA replication
nib03430  Mismatch repair
nib03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GU926_14190
   03430 Mismatch repair
    GU926_14190
   03440 Homologous recombination
    GU926_14190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nib03032]
    GU926_14190
   03400 DNA repair and recombination proteins [BR:nib03400]
    GU926_14190
Enzymes [BR:nib01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GU926_14190
DNA replication proteins [BR:nib03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GU926_14190
DNA repair and recombination proteins [BR:nib03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GU926_14190
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DEDDh_C DNA_pol_A_exo1 DNApol_Exo
Other DBs
NCBI-ProteinID: QHL88520
UniProt: A0A6P1P2A3
LinkDB
Position
complement(3365768..3366436)
AA seq 222 aa
MSNDFLPLFPNITPVLENVTVLDFETTGLSAGKGRVIEIAALRGANGKVVSQFQTMVRVE
APLPRKITEITGIRDEDLVHGMAEQAAFAILREFIGNSVVVAHNASYDLSFLYAAYRRYK
MPAIQHPFLDTLSVCRMRRPSPRSLADMCRVYNVPLPRWHRALPDTTATWHLLHRLHEEA
SVDPLLNKIVINPKYGSARWLPPLAELVPGPSFSKSDPKDVG
NT seq 669 nt   +upstreamnt  +downstreamnt
atgtccaatgacttccttccgctgtttcctaacatcacgcccgtactagagaatgtgacg
gtgctggattttgagaccacgggcctgagcgcgggcaaaggacgtgtgattgagatagcg
gccttgcgcggcgccaatggcaaagtagtctcacagtttcagaccatggtgagggtggaa
gccccgcttcctcgaaaaatcacggagattacaggcataagggatgaggacctggtacac
ggcatggcagagcaggcggcgttcgccattctgagagaattcattggaaacagcgtggta
gtggcccacaacgcaagctatgacctaagcttcctgtacgccgcttaccgacgttataaa
atgcccgccatccaacacccgttcttggacacgctctctgtatgccgcatgcggcggcct
tcgcccagaagcctggcagatatgtgccgggtctataacgtgccccttccccgctggcac
cgcgctttgccagacaccacggccacctggcacctgttgcaccgcctgcacgaagaagct
tctgtggaccccttgctcaataaaatcgtcatcaaccccaaatatgggtcggcgcgttgg
ttgccgccgttggcagaactggtgccgggcccgtcgttttccaagtcagaccccaaagat
gtaggctag

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