Nibribacter ruber: GU926_14310
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Entry
GU926_14310 CDS
T06388
Name
(GenBank) DUF3494 domain-containing protein
KO
K20276
large repetitive protein
Organism
nib
Nibribacter ruber
Pathway
nib02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GU926_14310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_6
Ice_binding
CHU_C
DUF11
CARDB
Motif
Other DBs
NCBI-ProteinID:
QHL88544
UniProt:
A0A6P1P2B9
LinkDB
All DBs
Position
complement(3397946..3403720)
Genome browser
AA seq
1924 aa
AA seq
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MRKLLLLALLLSYFTFTGQAQTTAPALGKAFPFTVLAKTGVSSSGDTKINGNAGVAPSDI
FAGFPPGIVIGTKEINTPNAIAAQADLVLAYNQAAGQTPTQTLTGQDLGGKVLTPGVYRF
EGDANLTGNLVLDNGGNPNAVFIFQVKGNLKINSFAKVELLEGGAQPRIKSIFWQVAGNT
NIGSFSTFRGTLLAQGDIMAGSSAAVFGRLLTHGGGISLLSNNITIPTDLEVTMTKSPGD
SKGNYYVGNIVKYTVYAKNNGPIDESNVRVAFQNTGLTLVSTGTLPAGTSYTDNTKQWNI
PSLANGATYTFEISYRINNDALANLVNTATIQGDGLDEVRENNEYTVTLCVAPADPTEIT
GPAAVCVDTEQTYSVTNIKVATQYNWTIPDGWRIVGSSSGSSIKVLAGPNGGNITVTAGN
TCGLSAPVSKSVIVTTSPSPAPGAITASNGSSNPCSGTQNVKYTVAAIPNASTYNWTLPS
GWVITAGAGTNSITVTVGSGSGDITVRAVNPCGPSEPSVLKVLASSSAPTAPPTIIGSNF
PCAGVTTEYSVSAETGATYFNWTLPTGWKIVEGAGTNTIKVEVGSGAGSITVSGINGCGT
SSTTSLAVTPTANTAPSIIDGPLTPCASPTGEVYTYTVGAVPGASSYFWKVAGGLSIVEG
QGSASVKIRVTSSVVSGTLTVSALNTCGQSAEKSITISPLNKPARPSEITTTTTMPCAGD
QNLRFSISPVAGATSYAWTFPTGWVISGASDGTTVTVRAGSTAGNVTVAAINSCGAGIER
TLAVTPTLNAPEKPLSLAGSTSLCVTDKEVVYTIATGTDATGYRWEVPANWTIVSGQGTT
TLKVNPANTNGSVKVFALNNCGESVAASLAVIVSTAPTPAPGFITTSPIAPCINQQNVSF
SVDPIFGATAYEWTVTGDWTITAGQGSTTIKVTIGSGPGTVSVKARNGCGLSEASSTTIQ
PATTPPATPVTVVGRTAVCELESNVTYTVTGMTNVTGYTWTITGGNDWSITSGQGTASIK
VKAGVAPAEISVVATNNCGQSSAKVIQVVTSKVAPGAPGAISGSVNVCAGNESVEYSVAA
VTGATSYIWTLPTGWTYTQSAAGNSISVKVGSTSGKIKVRAVNGCGESTESEITVAPTTG
TPPKPGNILAGTTAVCEAEQGVSYIVPPVNGASSYNWTVPADWTITSGQGTTTISVTVGK
AAGNISVTAVNNCGNSAASTLAVKPNIIPSKPLAIAGEALPCSGSTGTKYVVPTMPGATS
YVWTLPLGWTITSGEGTNSITVKTGTTAGEITVRAGNECGFSEAAVLEVKTTSTAPTAPL
AITGNQVVCAGETEVEYKVDAIANTSSYNWTLPSGWLILTGQGTTRITVQPSSTAGNISV
IAANGCGVSTASTLGVQVTGVIPPAPTTITGAQAPCVNTTGIVYTVGTVSGATRYTWEVP
AGWTITSGQGTTSITVTTGTEGGAISVMSGNGCGNSAAKTIAVITNTAPAKPQTITGLVN
ACFGSTNVTYSVPAITGATGYLWKAPAGWIITSGQNSNTIKVTVGDKNGEISVIAQNQCG
NSETTTLAVTTSLSPSPAPGAITSDAVKLICQNAPGLVYTIDAISTANSYTWTVPTGWTI
TAGQGTTSITVTSGTKSGSISVKAVNGCGESDASTLAVSVNEEQQAQLGDILGATNLCSN
EKGLVYTVAAIEGATEYIWTLPADTDWKIESGQGTNSITLTSGRKEALLTVVAKNTCSTS
APRTKLLTPYPAPTAPTAINQVGKCGQLEFTVVGGDAVSYNWELPKGWTFTSGQGTNRIL
VSAPQGGFNGTVFVTANNNNGCSSDPISVIANPAAAQAQLDFSNALTPNGDGINDTWKIK
NIESYPENELVIMNRWGSEVYRTKGYQNTWNGGELSEGTYFYVLKVKMCDGTMKSTPGYM
MIIR
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacttctactcctcgcacttctcctttcttatttcacatttacgggccaggcc
cagactacggctccagccctaggcaaagcctttccgtttacggtgctcgccaaaacaggc
gtttctagttctggagatactaaaatcaacggaaatgcgggggtagccccgagtgatatt
ttcgcaggctttccgccgggtattgtgattggtactaaagaaatcaacacgcctaacgcc
attgcggcacaggctgacttggttcttgcctacaaccaggcagccggccagacacctact
caaactctaacaggtcaagacttgggaggcaaggtacttacgccaggcgtctaccgcttt
gaaggcgatgccaatctgacaggcaaccttgtcctagacaatggcggcaatccaaatgct
gttttcattttccaggtaaaaggaaacctcaagataaactcctttgcgaaagtagagctc
ttagagggaggagcgcaaccacgcatcaagagcatcttctggcaagtggcaggcaatacc
aacatagggtctttctctacctttagaggtacgctcttggcccagggagacatcatggcc
ggtagtagtgccgctgtcttcggccgcttattgacgcatggtggtggcattagcttactc
agcaataacattaccattcctaccgatttggaagtcaccatgactaaatcaccgggagat
tcaaaaggcaattactatgtggggaatatagttaagtatacagtttacgccaaaaacaac
ggacctattgatgagtctaacgttcgcgtggctttccaaaacacaggtcttaccctagtg
agcacaggcaccctgccggctggtaccagctataccgataatactaagcagtggaacatc
cctagcttagccaacggtgccacatatacttttgagattagttaccgcattaataatgat
gcccttgctaacctggtaaatacagccaccattcaaggtgacggtctggatgaggtacgc
gagaacaacgagtacacggtaaccctttgcgtggccccagctgacccaactgaaatcacg
ggccctgctgccgtctgcgttgacacggagcaaacctacagcgttaccaacatcaaagtg
gccactcagtacaactggactattccagatggctggagaattgtaggaagctcctcagga
tcttccattaaagtgcttgccggtccaaacggaggtaatatcacagtaacagcgggtaat
acctgcggtttgagcgccccagtgagcaaatctgtgattgtaactaccagcccgtcgccg
gcccctggtgccattacggctagcaatggttctagcaacccatgttccggcacccagaat
gtaaagtataccgttgccgctattcctaatgcctctacttataactggaccttgccttct
ggctgggtaattacggctggtgccggtactaactctatcacggttaccgtaggttctggc
tctggagacattacggtaagagccgtaaacccttgcggacctagtgagccaagcgttttg
aaagttttggcttcttcttcggcccctacggctcctcctactatcattggtagcaacttc
ccttgtgctggcgtgactacagaatatagcgtgtcagctgaaacaggcgccacgtacttc
aactggaccttgcctaccggctggaaaattgtggaaggcgcaggcaccaacactattaaa
gtggaagttggttctggagccggttctatcactgtttccggcatcaacggttgcggtacc
agcagcaccacttctttagcggtaacgccaacagccaatacagctccttctatcattgac
ggcccgcttacgccatgcgcatcgcctaccggtgaggtgtacacctacaccgttggcgcc
gtgccaggtgcttccagctatttctggaaagtagccggcggtctttctattgtagaagga
caaggttctgcttcggttaagattagagtaaccagctcagttgtaagtggtacgcttact
gtaagcgccctgaacacctgcggtcaaagcgcggagaagagcatcaccatctctcctttg
aacaagccagctcgtcctagcgaaatcaccactactactaccatgccatgcgctggagac
cagaaccttcgtttctctatctctccagtagccggtgctacttcttacgcatggactttc
ccaacgggttgggtcatctcaggtgcctctgacggaaccaccgttactgttagagccggt
agcactgctggcaacgtaaccgtggccgccatcaattcatgcggcgccggaatagaaaga
accttagccgtaactccaacgctgaacgccccagagaaacctctgtcattggcaggtagc
accagcctttgcgtaacagacaaagaagtggtttacaccattgccaccggcacagatgca
actggatacagatgggaagttccagccaactggaccattgtttctggtcagggcactacc
actttgaaggtaaacccagccaataccaacggttctgtaaaagtatttgccttgaacaac
tgcggtgaaagcgttgctgcttccttagctgtcattgtttctacagcacctaccccggct
cctggtttcatcactaccagcccgattgctccatgtatcaaccaacagaacgtttctttc
tcagttgatccaatctttggtgctactgcttatgagtggaccgtaaccggtgactggact
atcaccgccggtcaaggttctactactattaaagtaaccatcggttcaggcccaggaact
gtctctgttaaagccagaaacggttgtggtttaagtgaagccagcagcactactattcaa
cctgccactactcctccagccactccagtaaccgtagtgggccgtacggctgtctgcgaa
ctggaaagcaacgttacctacaccgttacgggcatgaccaacgtgaccggttatacctgg
actatcaccgggggcaacgactggagcatcacttctggtcaaggaacggcttctatcaaa
gtaaaagcaggggttgccccggcagaaatctctgtagtggccactaacaactgcggtcag
agctcagccaaagtgattcaggtagtaaccagcaaggttgctccaggagcaccgggtgcc
atctctggttcagtgaacgtgtgcgccggcaatgaaagcgtagaatactcagtggccgct
gttacaggtgctacttcttacatctggactctgcctactggctggacatacacccagagc
gctgctggtaattctatctccgtgaaagtaggtagcaccagcggaaagattaaagtaaga
gcagtaaacggttgcggtgaaagcactgaaagcgaaattacggtggctcctactacaggt
accccgccaaagccaggcaacattctggctggcacaacagcggtgtgtgaggctgagcaa
ggtgtttcttacattgttcctccagtaaacggcgcttcttcttataactggaccgtacct
gctgactggaccattacttcaggacaaggtaccaccaccatttcggtgacagtaggtaaa
gccgctggcaacatttctgtaacggccgtgaacaactgcggaaacagcgccgccagcacc
ttggcagtgaaaccaaacatcattccatctaaaccacttgccattgccggcgaggcccta
ccttgcagcggcagcactggtaccaaatacgtagtaccaaccatgccaggcgctacatct
tacgtgtggacccttcctttaggctggaccattacatctggcgaaggaacgaacagtatc
accgtaaaaactggcactactgctggagaaattactgtaagagctggaaacgagtgtggt
ttcagtgaggctgccgttcttgaagtgaaaactaccagcactgctcctactgctccgctt
gccattacaggtaaccaggtagtctgcgccggcgagacagaagtagaatacaaagtagac
gccattgccaatacttctagctacaactggaccttgccatctggctggttgattctaacc
gggcaaggtactacccgcatcacggttcaaccatcttctactgccggtaacatctctgtc
attgcagccaacggttgcggtgtgagcacagccagcaccttgggagttcaagtaacgggt
gttattcctccggctccaaccaccattactggtgcacaggcaccatgtgtgaacactaca
ggcattgtgtatacggtaggtaccgtttctggcgccaccagatacacttgggaagtacca
gcgggctggactattacttcgggccagggaactacctctatcacggtgactacaggtaca
gaaggtggtgccatctctgtcatgtcaggtaacggttgtggaaacagcgctgctaaaacc
atagctgtcatcacaaacactgctccggcaaaaccacaaaccattactggtctggtgaat
gcttgctttggctctacaaatgttacgtacagcgtaccagccatcacaggtgccactgga
tatttatggaaggcgccagcaggctggatcattacttccggtcaaaacagcaacaccatt
aaggtaactgtaggagataaaaacggagagatctcagtaatagctcaaaaccaatgcgga
aacagtgaaaccactacgcttgccgttacaacttcactttctccatcaccagcgccaggt
gccatcaccagcgacgcggttaaactgatctgtcagaacgcaccaggtttagtgtacacc
attgatgccatcagcactgccaactcgtacacctggaccgtacctacaggctggactatc
acggccggtcagggaactacttctatcaccgttacctcaggcaccaagtctggtagcatc
agcgtgaaagcagtaaacggttgcggcgagagtgacgccagcaccttagcagtttctgta
aatgaggagcaacaggcccagttgggagacatcttaggagctaccaacctctgtagcaat
gaaaaaggcctggtatatacagtggccgccattgaaggagctactgaatacatctggaca
ctgccagcagacacagactggaagattgaatctggacagggcactaactctatcacgtta
acctctggcagaaaagaagccttgttaaccgtggtagccaagaacacctgctctaccagt
gcgccaagaaccaagttgttaacaccataccctgctccaactgcccctaccgccatcaat
caggttggtaaatgcggtcagctagaattcacggtagtaggtggagatgcggtttcttat
aactgggagttgccaaaaggatggacatttacgagcggccaaggcactaaccgtattctg
gtgtctgcaccacaaggcggtttcaacggtaccgtatttgtaacggccaacaacaacaat
ggctgtagcagtgatccaatctcagtaatcgctaacccagcagccgcacaggctcagctt
gacttctctaacgcgcttactccaaacggtgacggcatcaacgacacctggaagattaag
aacattgaaagctatccagagaatgaactggtgattatgaaccgttggggttcagaagta
tatcgcaccaaaggataccagaacacctggaacggcggtgagctcagcgagggcacttat
ttctatgtgctgaaggtgaaaatgtgcgatggcactatgaagtcaacacctggatatatg
atgatcatacggtaa
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