KEGG   Nibribacter ruber: GU926_15035
Entry
GU926_15035       CDS       T06388                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
nib  Nibribacter ruber
Pathway
nib03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GU926_15035 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nib03400]
    GU926_15035 (uvrB)
DNA repair and recombination proteins [BR:nib03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GU926_15035 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GU926_15035 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_5 AAA_16 AAA_30 AAA_19 AAA AAA_7 DUF87 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: QHL88671
UniProt: A0A6P1P2Q8
LinkDB
Position
3580051..3582084
AA seq 677 aa
MKFQLTSEFKPTGDQPRAIAQLTEGVNHGEHAQVLLGATGTGKTFTVANVIQEVQKPTLV
LCHNKTLAAQLYGEFKQFFPNNAVEYFISYYDYYQPEAYIASSDVFIEKDLAINEEIEKL
RLHATSALLSGRRDVIVVASVSCIYGIGNPEEFGKNVIPLAAGMKVSRNNLLYQFVSILY
SRTEVEFTRGTFRVKGDTVDIYPAYADFAYRIYFWGDEIESIQRIDPESGKKIADEESIS
LFPANLFVTGKDTLNQAIHEIQYDMVAQHEYFLKEGRDNEAKRIKERTEFDLEMIRELGY
CSGIENYSRYFDRREPGARPFCLLDYFPDDFLMVIDESHATLPQVRAMWGGDRSRKTALV
EYGFRLPAAMDNRPLTFNEFESVMHQVIFVSATPGDYEIQKSEGVIVEQIIRPTGLLDPE
IEIRPSQNQIDDLLDEVDNRIKRGDRVLVTTLTKRMAEELCKYMERLNIKVKYIHSEVKS
LERVEILRELRLGDIDVLIGVNLLREGLDLPEVSLVAILDTDKEGFLRDQRSLIQTIGRA
ARNENGKVLMYADRITGSMQRAIDETNRRRATQMEYNQEHGITPKTIFKSKEAIMDQTSV
ADSNKREAKAYAGPDESLMSIAADPVVQYMKRDELEKVIKKTEKQMEAAAKELDFLQAAK
FRDELAELRKLLKAKRD
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgaagtttcaactaacctcagaattcaaacccaccggcgaccagccccgcgccattgcc
cagctcaccgaaggcgtgaatcacggcgagcacgcgcaggtactgcttggggccaccggt
acgggtaaaacctttaccgtggccaacgtgatacaggaagtgcagaagcccacgctggtg
ctttgccataacaagaccctggctgcgcagctgtacggtgagttcaagcaattcttcccc
aacaacgccgtagagtatttcatctcttactatgactactatcagcccgaggcctacatt
gcttcttctgatgtgttcattgaaaaggacctggccattaacgaggagatagagaaactg
cgtctgcacgccacatcagctttgctgtcgggtaggagagatgtgattgtggtggcctcc
gtttcctgcatctatggtattggtaacccagaggagtttggtaagaacgtgattccgttg
gcggccggcatgaaggtgagccgcaacaacctactctaccagtttgtgtccatcttgtac
agccgcaccgaggtggagtttacccgtggaacatttagggtgaaaggcgataccgtggac
atctatcccgcctacgccgacttcgcctaccgcatttatttctggggcgacgagattgaa
tccatccagcgcattgaccccgagtctggcaagaagatagccgatgaggaaagcatctcg
ctgtttccagccaacctcttcgtgacgggcaaagacacgcttaatcaggccatccatgag
atccagtatgacatggtggcccagcacgagtatttcttgaaagaaggccgtgacaatgaa
gctaagcgcattaaggaacgcaccgagtttgacctagagatgattcgggaactgggctac
tgctctggtattgagaactactcccggtactttgaccgccgtgagccaggcgcacggcct
ttctgtcttttggactacttcccagacgatttcctgatggtgattgatgagagtcatgcc
accttgccacaggtacgcgccatgtggggtggtgaccgttcgcgcaagaccgcgctggta
gaatatggctttagattaccggccgccatggacaaccgcccgctcaccttcaatgagttt
gagagcgtcatgcaccaagtcatttttgtaagcgccacgcccggcgactatgaaattcaa
aagtctgaaggcgtgattgtagagcagatcattcggcctaccggtttgctggacccagag
attgaaatcaggccaagccagaaccagatagatgacttgctagacgaggtagacaaccgc
atcaaacgtggtgatcgtgtgctggtgactacgctcaccaaacgcatggccgaagagctt
tgcaaatacatggagcgcctcaacatcaaggtcaagtacattcactcagaggtgaaatca
ctggagcgcgtggagattctgcgtgaactgcgtctaggcgatattgacgtactcattggc
gtgaacttgctccgtgaaggtcttgacttacccgaggtgagtttagtggccattctggat
accgacaaagaaggcttcctgcgcgaccaacgctccttgatacagaccataggccgcgcc
gcgcgtaacgagaatggcaaggtgctcatgtacgccgatagaatcacgggctctatgcaa
cgcgccattgatgagaccaaccgacgccgtgccacgcagatggagtacaaccaggagcat
ggcattacgcctaagactatcttcaagtccaaggaagccatcatggaccaaacctcggtg
gcagactctaacaagcgcgaagcaaaggcctacgccggaccagatgaaagcctcatgtcc
attgccgctgacccagtggtgcagtacatgaagcgcgacgagctggagaaagtcatcaag
aaaacggagaagcagatggaagccgctgccaaagaactggactttttgcaagccgccaag
tttagagatgaattggccgagcttcgcaagttgttgaaggcaaagagagactaa

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