Nibribacter ruber: GU926_15460
Help
Entry
GU926_15460 CDS
T06388
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nib
Nibribacter ruber
Pathway
nib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GU926_15460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nib03021
]
GU926_15460
03400 DNA repair and recombination proteins [BR:
nib03400
]
GU926_15460
Enzymes [BR:
nib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GU926_15460
Transcription machinery [BR:
nib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GU926_15460
DNA repair and recombination proteins [BR:
nib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GU926_15460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Sec23_BS
Motif
Other DBs
NCBI-ProteinID:
QHL88749
UniProt:
A0A6P1P2W8
LinkDB
All DBs
Position
3655150..3656139
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKSDDFHGQFEFKPLEKGYGVTIGNALRRILLSSLEGYAISSIRVP
SVLHEFSTIEGVVEDVSEIILNLKMVRFKKVGDLVDDKITVSISKQDTFTAGDINKFSGS
FQVLNPDLVICHLDPEASFEIELTIQKGRGYVPAEENKPADQVFGQIAIDAIFTPIKNVK
YSVENTRVEQKTDYERLLLEISTDGSIHPEDALKGAANILIQHFMLFSDNTMTFETVKPE
EEEAVDEEMLHMRKVLKTPLHDMDLSVRAYNCLKAADIRTLGDLVQLDLADMMKFRNFGK
KSLTELENLVSEKGLNFGMDISKYKLEED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatattagcatttcaaatgccagagaaagtcgtgatggagaaatccgatgacttc
cacgggcaatttgaatttaagccgctagagaagggctatggtgttaccattggaaatgcg
ctgagaagaatccttctttcttcattggaaggatatgctatctccagcattcgtgttcct
agcgtactccatgagttctctaccattgaaggtgtggttgaagatgtctctgaaatcatc
ctgaacttgaaaatggttcggtttaaaaaggttggtgacttagttgatgacaagattact
gtcagcatcagcaagcaagacaccttcactgccggtgacatcaacaaattctctggttcg
ttccaggtgttaaatcctgacttggttatctgtcacctagatccagaagcttcttttgag
attgaattgactattcaaaaaggcagaggctatgttcctgccgaggagaataagccagct
gaccaggtgtttggccaaattgccatagatgccatcttcacacctatcaagaatgtgaag
tatagcgttgaaaatacgcgtgtagagcagaagacggattatgagcgtcttttattggag
atttctactgatggttccatccatccagaagatgccttgaaaggtgctgccaacatcttg
attcaacacttcatgctgttctcagacaacaccatgacttttgagactgtgaagcctgaa
gaggaagaagcagttgacgaagaaatgctgcatatgagaaaagtcttgaagacgcctctc
catgacatggatctttctgtacgtgcctacaactgcttgaaagcagctgacattagaacg
ttgggagatttagtacaattagacctggcagatatgatgaagttcagaaactttggtaag
aaatctcttactgagttggagaacctagtatctgaaaaaggtcttaactttgggatggat
atctcaaagtataaactagaagaagattag
DBGET
integrated database retrieval system
