Nibribacter ruber: GU926_16650
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Entry
GU926_16650 CDS
T06388
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
nib
Nibribacter ruber
Pathway
nib02024
Quorum sensing
nib03060
Protein export
nib03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GU926_16650
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GU926_16650
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GU926_16650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nib02044
]
GU926_16650
Secretion system [BR:
nib02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GU926_16650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QHL88970
UniProt:
A0A6P1P3I4
LinkDB
All DBs
Position
complement(3946230..3949220)
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AA seq
996 aa
AA seq
DB search
MRNKGFLIFLTVIVSVLCLYYLSFSLVSGKVEDKATAYATNASGQVDHYKKQTYLDSVWK
APVWNFLGKDYTYQEIKESELGLGLDLKGGMHVTLEVSPVEIIKAMAGNRKDPAFEKAIA
QAQKLQVNSQENFVDLFYRSYREIAPNAKLSSLFANSANRNLSYASSDKDVLAEINREVN
DAVARSFNILRTRIDKFGVNQPNIQQLKGTNRIQIELPGVDNPERVRRLLQGTANLEFWE
VWRTDEFAPYFTQLNDYLVKEESANKLKGTSTTGASTLAAAAAPADTTLAKAAGDTTALA
NQLAKVDTAKAKTDSLNTNQSSLLSRLFTPLPGGLGSNVRDTAKVNALFAKEEVRALFPQ
NMKFLWSVKPIVANDGAEFLELFAVKKGRDGKAPLTGEYIADARQDYSQTGQPEVNMSMN
VAGSKKWQRLTADNIGRQVAIVLDNYVYSAPVVQNEISGGSSSISGSFTIDEAQDLANIL
KAGKMPAPTRIVEEAIVGPSLGQEAINQGLISSLAGLVLVVIFMIAYYAKGGIIANIALL
FNIFFIIGILAQFGTALTLPGIAGMVLTMGMSVDANVLIFERIKEEMAAGLNIQEAIKKG
YSKAFSSIFDSNVTTLLAGIILFFFGSGPVKGFAITLMIGIATSFFTAVYVSRILIEWMA
KGEKASTLSLETPLSRNWFKNIKFDILGNRKKAYLFSTVLIAFGIAAVFIKGELPLGVDF
KGGRSYVVDFTSAVPASDVRSALDDEFQGKGTEVKTYGATNRLKVTTSYLAEDESTQADE
TVQAALVQGLKEYQAQSPKIVSSSKVGATMADDIQKTAVIAVLLAFAGIFLYLAFRFSRW
QYSLGGVIALIHDVLVVFSAFTIANLFGVSFEMDQVFIASILTIIGYSINDTVVVFDRIR
EYTQENPRMKFKDIVNPALNSTFSRTIITNLTVLLVVIVLFIFGGETLRGFSFAMLVGSL
TGTYSTLFIASPIVVDTTNVDKENVTTTSAKPVIVS
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacaaaggatttcttattttcctgacggtgatagtctcggtcttgtgcctgtac
tatctatcgttctctctggtatcaggtaaggtggaagacaaagccacggcctatgccacc
aacgcctcagggcaggtggaccactataaaaagcaaacctatctggactctgtctggaaa
gctccggtttggaatttcttgggcaaggattacacctaccaggaaatcaaagaaagcgaa
ttgggccttggtcttgacttaaaaggcggtatgcacgtgacgctggaggtttctccagtg
gaaatcatcaaagccatggccggcaaccgcaaagacccggcgtttgaaaaagccattgcg
caggctcagaaactgcaggtaaacagccaggagaactttgtagacctgttctaccgctct
taccgcgagattgcccctaacgccaaattgtcttcattgtttgccaacagcgccaaccgc
aacttaagctacgcttcttcagacaaagatgtactggcagaaatcaaccgtgaggtaaat
gacgccgttgcccgttcattcaacatcttgcgcacccgtattgacaagtttggcgtaaac
cagcctaacattcagcaactgaaaggcaccaaccgcatccagattgaattaccgggtgta
gacaatcctgagcgtgttcgtagattgttgcaaggaactgctaatctggagttctgggaa
gtatggcgcacagatgagttcgctccttatttcacccaactgaatgactacctggtgaaa
gaagagtctgccaacaaattaaaaggtacttctaccactggtgcctctaccctggcggcc
gctgcggctccagcagacactacgctagccaaagccgctggtgacactaccgctcttgcc
aaccaactggccaaagtagacactgccaaagccaaaactgactctttaaacaccaaccaa
agctcactgttgtcgcgcttgttcacgccgcttccgggtggtttgggttcaaacgtacgt
gacactgccaaagtaaacgccttgtttgccaaggaagaagtacgcgccctgttcccgcag
aacatgaagttcttgtggagcgtgaaaccaatcgtggccaatgacggtgctgagttcctg
gaactgtttgccgtgaagaaaggccgtgacggcaaagcacctctgacaggtgagtacatt
gcagacgcccgccaggattacagccaaacaggtcagccagaagtaaacatgagcatgaac
gtggccggttctaagaaatggcagcgtttaacggcagacaacattggtcgtcaggtagcc
attgtgctagacaactatgtgtactctgcgccagtggtacagaatgagatcagcggtggt
agctcttccatctctggttctttcaccattgacgaggcccaggatttggccaatatcttg
aaagctggtaaaatgccagcgcctacccgcattgtggaagaggccattgtaggtccgtcg
ctgggtcaggaagccattaaccaaggtttgatttcttctttggctggtttggtattggta
gtaatcttcatgattgcctactatgcaaaaggtggcatcatcgctaacattgccttgttg
ttcaacatcttcttcatcattggtattctggcccagtttggcaccgcccttaccttgcct
ggtattgctggtatggtcttgaccatgggtatgtctgtagatgccaacgtattgatcttt
gagcgtatcaaagaagaaatggccgccgggcttaacattcaggaagccatcaagaaaggg
tatagcaaagcattcagctccatctttgactccaacgtgaccacgttgctggccggtatc
atcctgttcttcttcgggtctgggccggtgaaaggttttgccatcactttgatgattggt
attgccacttcattcttcactgccgtgtacgtttcaagaatcctgattgagtggatggcg
aaaggcgaaaaagccagcaccctatccctggagacgccgctttccagaaactggttcaag
aacatcaagtttgacattctgggcaatcgcaagaaggcctatcttttctctaccgtgctt
attgcctttggtattgccgccgtgttcatcaagggagaacttcctcttggggttgacttt
aaaggaggccgttcttacgtggtagactttacctctgccgttccggcatctgacgtacgt
tctgccctggatgacgagttccagggaaaaggtaccgaagtaaaaacgtatggtgccact
aaccgcttaaaagtaaccaccagttatttggcggaagatgagtctacccaggcagatgaa
accgttcaggcggccttggtgcaaggcttgaaagaataccaggcacagagtcctaaaatc
gtaagctcttctaaagtgggtgctaccatggccgatgacattcagaagacggcggttatt
gccgtgttgctggcttttgccggaatcttcctctacctggccttccgtttcagccgctgg
cagtatagcttgggcggggtaatcgccttgatccatgacgtgttggtggtattctctgcc
tttaccattgccaacctgtttggagtttcttttgagatggaccaggtgttcattgcctcc
atcctcactattattggttactccatcaatgataccgtggtagtgtttgaccgtatcagg
gaatacacgcaggaaaacccacgcatgaagttcaaagacattgtaaacccagccttgaac
agcacctttagccgtaccatcattaccaacttaacggtattgctggtagtgatcgtgctc
ttcatctttggtggtgaaacactgagaggcttctcgtttgccatgttggtaggttctttg
accggtacgtattctaccttgttcattgcctctcctattgtagtggacactaccaacgta
gacaaagagaacgttaccaccacttctgccaagcctgtgattgtttcatag
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