Nibribacter ruber: GU926_16855 Help Entry GU926_16855       CDS       T06388                                  Symbol recQ Name (GenBank) DNA helicase RecQ   KO K03654   ATP-dependent DNA helicase RecQ [EC:5.6.2.4] Organism nib  Nibribacter ruber Pathway nib03018   RNA degradation Brite KEGG Orthology (KO) [BR:nib00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     GU926_16855 (recQ)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nib03019]     GU926_16855 (recQ)    03400 DNA repair and recombination proteins [BR:nib03400]     GU926_16855 (recQ) Enzymes [BR:nib01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      GU926_16855 (recQ) Messenger RNA biogenesis [BR:nib03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      GU926_16855 (recQ) DNA repair and recombination proteins [BR:nib03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       GU926_16855 (recQ) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD RQC RecQ-1-like_HTH Helicase_C HRDC RecQ_Zn_bind ResIII HTH_40 Motif Other DBs NCBI-ProteinID:  QHL89008 UniProt:  A0A6P1P3V2 LinkDB All DBs Position 3996091..3998271 Genome browser AA seq 726 aa AA seqDB search MLVKQDNFLKNKLKEVFGYSQFRGNQEAIIENIMAGKNTFVIMPTGAGKSLCYQLPALAM EGTAIVISPLIALMKNQVDQLNAFGVNAQFLNSTLTKAEINRVKRETINGDVKLLYVAPE SLTKEETLDFLKQANITFVAIDEAHCISEWGHDFRPEYRKIRGIIDSIGNLPIIALTATA TPKVQLDIQRNLQMDDASVFKSSFNRTNLYYEVRPKHQTKKQVIKYIKKNKGKSGIIYCL SRKKVEEIAELLKVNDIKALPYHAGLDAPIRMANQDAFLNEEADVIVATIAFGMGIDKPD VRFVIHYDTPKSIEGYYQETGRAGRDGLEGNCLMFYSYDDIVKLEKFSKDKPVTERDNSK LLLQEMASYADSAVCRRRQLLHYFGEMYNKDCGFCDNCVHPKEKFEAEKELILAIKAVQQ TKERFPMDHLVHVLMGMKDQYVESYSHDQLEVYGAGKEHDAAYWTSVLRQALLFDYLEKD IENFGTVKISAKGAEYLKKPHPIKFAKDHNFEEEVQQEEEKVETQAAAGHDTVLFDMLKS LRKKMAKELSLPPYVLFQDPSIKEMATTYPTNREDLAHIAGVGMGKVQKFGKPFLDLITK YVEENDIVTAADVVVKTTVNKSKLKIYVIQQIDKKMDLEEIASTKSITMAELIEEIEHIC YSGTKLNLDYYINGVLDQERQQEVMDYFMHATTDNMAEAMKELGTDDYTEDDLRLMRIKF LSKYAN NT seq 2181 nt NT seq  +upstreamnt  +downstreamnt atgttagtgaaacaagacaattttttaaaaaacaaattaaaggaagtttttggctatagt caattcaggggcaaccaagaagctataattgagaacatcatggcaggcaagaacacgttt gtgatcatgcccaccggcgccggcaagtcgctttgctaccagctgcccgcgctggctatg gaagggacggccatcgtcatttcgcctttaattgccctgatgaagaatcaggtggaccaa ttgaatgcctttggggtgaacgcacagttcttgaattctaccctgaccaaggcagagatt aaccgcgtaaagagggagaccatcaatggagatgtgaagttgctgtacgtggcaccagaa tcactaaccaaagaagagaccctggactttttaaagcaggccaacatcaccttcgtggcc attgacgaggcgcactgtatttctgagtggggccatgacttcaggccagagtaccgcaaa atcagaggcatcattgacagcattggcaacctgcccatcattgcccttaccgccacggcc acgcccaaggtgcagctggacatccagcgcaacctgcaaatggacgacgcttctgtgttc aagtcttctttcaatagaaccaacctgtactacgaggtgcgccctaagcaccagaccaaa aagcaggtcatcaaatacatcaagaaaaacaaaggcaagagtggcatcatctactgcctc agccgcaagaaggtagaagagattgccgagctgctgaaggtaaatgacatcaaagccctt ccgtaccacgccggtctggacgcccccatcaggatggcgaaccaggatgcgtttctgaac gaagaagccgatgtgattgtggccaccattgcctttggcatgggcattgacaaaccagac gtacgctttgtaatccattatgacacgcctaagtccattgagggctactaccaggagacg ggccgggccggacgtgacggactggagggtaactgcctcatgttctacagctatgatgac attgtcaagctggagaagttcagcaaggacaagccggtgacggagcgcgacaactccaag ttgttgctgcaggaaatggcctcgtatgcagactcagcggtgtgtagaagaagacagctg ttgcattacttcggggagatgtacaacaaggattgtggcttctgtgacaactgcgtgcac cctaaagagaagtttgaagccgagaaagagttaatcctagccattaaagccgtgcagcag accaaggagcgcttcccgatggaccacttggtacacgtgctcatgggcatgaaagaccag tacgtggagagctacagccatgaccagctggaggtctacggagccggcaaggagcatgac gccgcctactggacctcggtgctgcgccaggccttgttgtttgactacctggagaaagac attgagaacttcgggacggtgaaaatctctgccaaaggggcagagtacctcaagaagccg catcccatcaaattcgcgaaagaccataactttgaggaagaggtacagcaggaagaagag aaggtagaaacccaggccgcggccgggcatgataccgtgctgtttgatatgctcaagtcc ctgcgcaagaaaatggcgaaggagctaagcttgccgccgtacgtgctcttccaggatccg tccatcaaggaaatggccacaacctatcccaccaacagagaagacctggcgcacattgcc ggggtgggcatgggcaaggtgcagaagtttggcaagccgttcctggacctcattaccaaa tacgtagaggagaacgacattgtcaccgccgccgatgtggtggtgaagaccaccgtcaac aagtccaagctcaagatttacgtgattcagcagattgacaagaaaatggacctggaggag attgcctctaccaaatccatcaccatggccgagctgattgaggagattgaacacatctgc tactcgggcaccaagctcaacctggactactacatcaacggagttctggaccaggagcgt cagcaggaggtaatggactacttcatgcacgccaccacagacaacatggccgaagccatg aaagaactgggcaccgatgattacaccgaggacgacctgcgtttgatgcgcatcaagttc ttgtctaaatatgccaactaa

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