Nibribacter ruber: GU926_17905
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Entry
GU926_17905 CDS
T06388
Name
(GenBank) T9SS type B sorting domain-containing protein
KO
K20276
large repetitive protein
Organism
nib
Nibribacter ruber
Pathway
nib02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nib00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GU926_17905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_7
CHU_C
PKD_4
PKD
ChitinaseA_N
PKD_6
InlK_D3
K319L-like_PKD
Motif
Other DBs
NCBI-ProteinID:
QHL89202
UniProt:
A0A6P1P484
LinkDB
All DBs
Position
complement(4233359..4239676)
Genome browser
AA seq
2105 aa
AA seq
DB search
MPDAALEDVNKENFIKCSPVLGPFEFNLSVKNSSSTKATNQSYLVEWGDGTQNVYDNTFT
AATHKYKDRGKYDLKVTVTSQSGCTSSKTYAVYNGSNPGFGLQNGGNTSSCAPATYTFNI
TGTTNNSPTTTYKIWFDDGSDTLYFNQNNIPSSIDHVFETSSSKKENGFTIFGVAIDCYN
RKTPATISGFVVSGNPLADFAIVSPSRCVNSPIKLKDKSTGGFNPYNPNNSGGYNRKWSI
EPSTGWSFVNGTDEYSEEPEVVFHVSGTYNINITITPVGNSAVCPGDEHSAPIVIEDPAK
AAFTLRPEDIGSCAPNTIAAQNLSTGTNAAYRWSVSPAAGVQYVSGDSTSDNPTFLFNTA
GTYRITLTAKNSCGTTTAFEDVTILARPGVSLPAAAQYCGPQTIVFGPENTAHNPIYAAN
GTPISRYQWSVTDEAGQQLLDADQAAQSNPSVQLTQPGTYRVQVQAWNGCGESVATVQII
TIHPLPVAPAVTPVLVCKGATATLEAEGNGATYKWYASATATTALHTGITFTTPALQESA
TYYVEAVSDNGCASSTRTAVLVTVQDPPATPVVANNPAICAGTTASLQTAVANARIEWFT
SATEATPFFTGNTLDTLLTATTTFYVGSVTELGDCRSLTRTKVTVTVHPAISNNTITTQD
KGICQGAQTGVISASAPKGGFGAPQYQWQMSTDGENFEDLVSSTTQNLPSRALSTTTWFR
RSVTLGACTEITQSIKVTVVPPITQNVLTAPTEFICAGTVPPALSAEPLLGGDGSEPTFV
WESSTTKNGTYATAKGTGTLMSFQPDALPNSRWFRRKVIINGCEDISAPVEIKVNPLSLP
PTVSTSRSTICSGSTTVLTATAPSGPYTWYDAAIDGNLLYTGNSFTTPVLTNYTESAITV
TYYVQSEATGGCTVSRTAVKITVEPEIANNTLLPVARVCAGESPVIKGTVPTGGSGSPVY
TWQFSVDEGEEKTFKDASGTTKNSVSYTASNLAQTTWFRRKVKLGACESYSNIMRVEVTP
AMANNTLPASLKFCEGTTPPVLQQSAGTVISGGDPVEGIQYRWEMKTSLGDSFESAPGDN
TQASYQPSNITQSNTWFRRVAFSGSCVLESNTLVLQMSPKPALPVLAKTYLEVCVGGGAT
LQAAAKTGVVYQWYNQEGTFLASGNSLSISPADLTEARTYTYTVESKSTDACLSSERVAI
TLKVLPLLSESIAYGEQSVCTGSAPATKLSASAPAGGNGYYQYQWQFTTDLSKPFRNTSF
EDTMATYQLNELYVNTWFRRVLKSADCEKYSNAVKITVDVPVNNNIAITQGSPEVCFGVV
PAITLGGQPTGGDGKNYRYQWQYRTDATQPFVNTSAKDTLITYSPSALSSNTQFRRVVTS
GACAAAVSNLVELFVNPIPAAPVAQNVTICTGTKAKLTATGEGTLQWLDAKTGDILFTGR
AGSVFETPVLTATTVYHVRAIASPALCVGPIATVTVLVEEKISQNTLQGVADVCYATTPN
LLVGSTPAGGNGQYEYQWYIKAKNKTTFQEIPGATGKDYQHAQVLLLDTKFKRSVKAGEC
AEDFSQEIEIKVNMPLPEGSNYISPMAQFKAAGTKPSLLKGSTIPADYLIQWWYKTADMP
DFEPITGATSRDYQPNVLTETTLYLRQAKSKYVDCSSFSDTAKVTIFKAFTENTIAGGGQ
VCYKQPSNLVIKGNAPDGNLPDVQYYWEKRTQNSEYVLINNASPATAKDFQVPALEATTW
YRRKVVVNGVATLSNEVKVEVFDRVANNSISSSQTVCVGSAPTKLNGSLPTGGSGTYTYV
WESSTTNAATGFNTATGITSGQHYEPGGLVRTTWFRRVVLSGDCTSDVSNVVQVTATPLP
KAPVTQDVFLCAGNTVTLTASLPSSSTSGTVVEWYNQEKGGKLVHTGLTFTTPVLQSATT
YYVQTVSQSCASERVPVRVNIPAPTANAGPDVTIAYGKFTELSATGGVSYQWSPSLGLSN
DKVADPVAKPKTTTTYKVTVTTADGCTSTDDVTITVLAAVEIPNGFTPNNDGINDNWDIP
TLQGYPDVQVEVFNRWGNKVFESKGYQTPWNGTMKGQPLPAATYYYLIRLGGKEEPLSGN
VTIIK
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
ttgccagacgctgccctggaggatgtaaacaaggagaacttcattaaatgcagcccggtc
cttgggccgtttgagtttaacctttctgtgaagaactcctcctccaccaaggccaccaac
caatcttatttggtggaatggggtgatggcacgcagaatgtctatgacaacaccttcacg
gcggctacgcacaagtacaaagacagaggaaagtatgacctgaaggtgaccgtgaccagc
cagagtggttgcacgtcttccaagacctacgcagtgtataatggcagcaatcccgggttt
ggcttacagaacggcggaaacacgtcttcctgcgcccctgccacctacacgttcaacatt
accggtaccaccaacaactctcccaccaccacgtacaaaatctggtttgatgacggcagt
gacacgctgtatttcaaccagaacaacattccatccagcattgaccacgtatttgagacc
tcatcctctaaaaaggagaacggtttcactatttttggggtggccattgactgttacaac
cgcaagacgcctgctactatcagcgggtttgtggtatctggcaacccactggcagatttt
gccatcgtgtcgccttcgcggtgcgtgaacagtcccattaagttaaaagacaaatctacc
ggcggcttcaacccctacaaccccaacaacagcggcggctacaaccgcaaatggagcata
gaaccctctaccggctggagctttgtgaatggtacagatgagtattctgaagagcccgaa
gtggttttccacgtctctggcacctacaacattaacattaccatcacaccggtggggaac
agtgcggtttgtccaggagatgaacacagtgcacccattgtgattgaagacccggccaaa
gccgcttttaccttgcgtcctgaggatattggcagctgtgcgcccaacaccattgcggcg
cagaacttgagcaccggcaccaatgcagcataccggtggtcggtttcaccggcggccggc
gtgcaatacgtttccggcgactctacttctgataaccctacgttcctgttcaacacggcc
ggcacctaccgcatcaccttgacggccaagaactcctgcggcaccaccaccgcttttgaa
gatgtgaccatactggcccggcccggcgtttctctacccgcggcggctcaatactgcggc
ccgcagaccattgtcttcggtccagaaaataccgcgcacaatcccatatacgcagccaat
ggcactcctatcagcagataccaatggagcgtgacggatgaggctggccaacaattattg
gatgctgatcaagctgcgcagtcaaatccttcggtacaacttactcagccgggcacctac
cgggtgcaagttcaagcctggaatggttgtggggaatctgtagcgactgtacaaattatc
accatccatcctctgcctgtcgcccctgcggtaacgccggttctggtgtgcaaaggtgcc
acagctactttagaagccgaaggcaatggagccacctacaaatggtacgcctcggccacc
gccactacggccttgcatacgggcattactttcacaactccggcgctgcaggaatctgcc
acttattatgtagaagcagtttctgataatggctgcgccagctctacgcgtacggcggtg
ttggtaaccgttcaggatcctccggcgaccccggtggtagccaacaatcctgccatctgc
gctggcaccacagcttctttgcaaacggcggtggccaatgccagaattgaatggtttact
tctgccactgaggcaactcctttcttcaccggaaacaccttagacacccttcttacggct
accaccaccttttatgtgggcagcgtgactgagctaggtgattgccggtcattgacccga
accaaggtaaccgtgacggttcacccggccatcagcaacaacactatcaccacccaggac
aaaggcatctgccagggcgctcagaccggcgtcatttctgccagcgcgcccaagggaggc
tttggcgcaccgcagtaccagtggcagatgagcacagacggtgaaaattttgaagacctg
gtgtcttccactacccagaacctgccttcaagagctctgtccactacaacctggttcaga
agatcggtgaccttgggcgcttgtacagaaattactcaaagcattaaggtaaccgtggtt
ccgcccatcacgcagaacgtcctgaccgcgcccactgaattcatttgcgcgggcaccgta
ccgccggctctttctgcagaacctttgttaggcggcgatggctctgagccaaccttcgtc
tgggaaagcagcaccaccaaaaatggcacctacgctacggccaagggaaccggaacgctc
atgtctttccagccggacgccctgcctaatagccgttggttccgccgcaaggtcatcata
aacggttgcgaggatatttctgcgccagtggagatcaaggtaaatccgctttctttgcct
ccaacggtttcaacctctagaagcaccatttgcagcggctctaccaccgttttgacggcc
accgcccctagcggcccttacacctggtatgacgcagccattgatggaaacctgctatac
actggcaacagctttaccaccccggtgcttaccaactatacagaaagcgccatcacggtg
acgtattatgtgcagtcagaagccaccggtggatgtaccgtgagccgcacggccgtaaaa
atcaccgttgagccagaaattgcaaacaatacgctactgcctgtggcccgtgtgtgcgcc
ggcgagtctccggtgatcaaaggaaccgttcctacgggcgggtcaggctcaccggtgtat
acctggcagttcagcgtggacgaaggcgaagaaaagaccttcaaagacgcatcaggcact
accaaaaacagcgtttcttacacggccagcaaccttgctcaaaccacttggtttagacgc
aaggtaaaattgggcgcctgcgagtcttactctaacatcatgcgcgttgaagtgacgcca
gctatggccaataataccctgcctgccagccttaaattctgcgaaggcaccacaccaccg
gtattacaacaaagtgctggaactgttatcagcggtggtgaccccgtggaaggcattcaa
tacagatgggaaatgaaaacttccctaggcgattcatttgagtcagccccgggagacaat
acccaggccagctatcaaccatccaacatcacccagtccaacacctggttcaggagagtg
gctttttcaggtagctgcgtgctggaaagcaacaccctggtgctgcaaatgtcacctaaa
cctgccttgccggtattggccaaaacgtacctggaagtgtgcgtaggtggtggtgcgacc
ttgcaagccgccgcgaaaactggcgtcgtctaccagtggtacaaccaagagggaaccttc
ctggcctctggcaacagtttatctatttccccggcagacctgaccgaagccagaacctac
acctataccgttgaaagcaaatctacggatgcctgtctttcttctgagcgagtggccatt
accttaaaggttctgcctttgctgagtgagtctattgcctacggtgagcagtctgtatgt
acgggttcagcgcctgccaccaagctttcagcctctgccccagcgggtggcaatgggtac
taccagtaccaatggcagttcactactgacttgagcaaaccgttcaggaacacttcgttt
gaagacaccatggccacttaccagctcaacgaactatatgtgaatacctggtttaggaga
gtattaaaatctgctgactgtgagaaatactccaatgcagttaagatcacggtagacgta
ccggtaaacaacaacattgccatcacccagggctctcctgaagtatgcttcggcgtggtc
cctgccatcacacttggcgggcaaccgacgggcggagacggcaagaattaccggtaccag
tggcagtacagaacagatgccactcaaccgtttgtgaacacttctgccaaagacaccctc
atcacttacagtccaagtgccttatccagcaatacccaattcagaagagtagttacttct
ggcgcttgtgccgcagcggtgtctaatttggtggaactgtttgtgaatcctattccggca
gcgcccgttgcgcagaacgtaaccatctgcacaggcaccaaagccaaactgaccgccacc
ggcgaaggcaccctccaatggctagatgctaaaactggggacattctgttcacgggtaga
gcagggtctgtgtttgaaacgccagtgcttacggccactacggtgtaccatgtaagagcc
attgcctcgccggcactttgcgtgggcccaatagccacggtgacggtgttggtagaagag
aaaataagccagaacacccttcagggagtggcagacgtttgctatgccaccacgcccaac
ctgctggtgggcagcacgcctgcgggcggaaatggtcaatatgagtaccagtggtacatc
aaagcgaaaaacaaaaccacattccaggaaattccgggggctactggcaaagactaccag
catgcgcaggtcttgttgctggacaccaaattcaagcgcagcgtgaaagccggcgagtgt
gccgaagatttcagccaggagattgaaatcaaggtgaacatgccattgccagagggttcc
aactacatctcgcccatggcgcagttcaaggcggcgggcaccaaaccgtccctgttgaaa
ggcagcaccattccggcagactaccttatccagtggtggtacaaaacggcagacatgccc
gactttgagcctattacgggtgccaccagccgtgactaccagcccaatgtcttaaccgag
accacgctgtacctgcgccaggccaagtctaaatacgtggattgctctagtttctcagac
acggccaaagtgactattttcaaggccttcacggagaacaccattgcgggtggcggacag
gtatgctacaagcagccgtccaacctagtcatcaaaggcaatgcgccagatggcaatttg
ccagacgtgcagtattactgggagaagagaacgcagaattctgagtatgtactcattaat
aatgcctcaccggccacggccaaagatttccaggtacctgcgctggaagccacaacgtgg
taccgcagaaaagtagtagtaaatggagttgccacgctctctaatgaggtgaaggtagaa
gtctttgaccgcgtagccaacaactccatttcttctagccaaacagtgtgcgtgggctca
gcgccaaccaaactaaacggttcattgcctaccggcggaagcggcacttacacctatgta
tgggaaagcagcactaccaatgccgccaccgggttcaacacggccacaggcatcacctct
gggcagcactatgagccaggtggactggtaagaaccacctggtttagaagagtagtcctt
tcgggtgactgtaccagcgatgtaagcaatgtggtacaagtaacagccacgcctttgcca
aaagctccggtaacgcaggatgtgttcttgtgcgccggcaacacagtgaccttgaccgcc
agtttacctagcagctcaactagcggtacggtggtagaatggtacaaccaggagaaaggc
ggcaagctggtacacaccggcctcaccttcaccacgcctgttttgcaaagcgccactacc
tattatgtgcaaactgtatcacaaagctgtgccagtgagcgggtacctgtacgggtgaac
attccggcgccaacggccaacgctggcccagacgtgaccattgcctatggcaagtttacc
gagttgtctgctacgggtggcgtgagttaccagtggtcaccaagcctgggcttgagcaat
gacaaagtagctgatccggtggccaaaccgaaaaccaccactacttataaagtgacggta
accactgcagatggctgtacctccactgacgatgtgaccatcaccgttctggcggccgtg
gaaatcccgaacggttttacacctaacaatgacggcatcaacgacaactgggacattccc
accctgcaagggtacccagacgtgcaggtggaggtgttcaaccgctggggcaacaaggtg
tttgagtctaaaggctaccaaaccccgtggaacggaaccatgaaagggcagccgctgccg
gcagccacctattactacctcatccggttaggcggcaaagaggaacctctatctggaaac
gtaactattattaagtaa
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