Nitrosarchaeum sp. AC2: DSQ20_02005
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Entry
DSQ20_02005 CDS
T06694
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
nic
Nitrosarchaeum sp. AC2
Pathway
nic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSQ20_02005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nic03021
]
DSQ20_02005
Enzymes [BR:
nic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSQ20_02005
Transcription machinery [BR:
nic03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DSQ20_02005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF7245
MRNIP
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QLH10407
UniProt:
A0A7D5RBK3
LinkDB
All DBs
Position
362920..366267
Genome browser
AA seq
1115 aa
AA seq
DB search
MADPSVKRWPIIQDILKREGIARQHLNSFDEFLERGLQSIINEVGQIEIENAEYPYKIQL
GKVKLQQPRMMELDGSITHITPAEARLRNVSYSAPVMMEASVVEDGKILESRFVHIGDVP
VMAKSNACILHNFSTQKLVEHGEDPNDPGGYFIINGSERVIVGLEDLSYNKIIVDRESVG
GNTVFKAKVYSSIVGYRAKLELVMKNDGLIVARIPGSPVDIPVVTLTRALGLESDREIAA
AVSLVDEIQNELEGSFEKAGDVPTAKDAIVYISKRIAPGMLEEFQIKRAETLLDWGLLPH
LGKHPENRKEKAQFLGEAACKLLELKLGWISPDDKDHYGNKVIKFAGQMLADLFRTAFRN
LVRDMKYQLERSGQKRGINAVAAAIRPGIITDKLNNAIATGNWGRGRVGVTQLLDRTNYL
STISHLRRIQSPLSRTQPNFEARDLHATHFGRICPSETPEGSNCGLVKNLALSGIISVNV
PSEEIVEKLYDLGTIHFFDAKEDVKKDGARIFVDGRLIGYYKDGAELAESLRELRRNSKI
HPHVGISFHQSAIEGSTKRLYVNCNAGRVLRPLIIIKDNKPLLTQDLLDKISKKLLSWTD
LLRMGVLEMIDANEEENCYITLDEKDSKKHTHLEVFPPAILGAGASIIPYPEHNQSPRNT
YESAMAKQSLGFSTPMMNTSTYVRQHLMLYPQTPIVNTKAMKLLGLEDRPAGQNCVVAVL
PFDGYNIEDAIVLSRSSVDRGLGRTFFFRIYDAEAKQYPGGMRDAFEIPNAEDNIRGYKG
EKAYRLLEEDGVVASESPVHGGDILIGKTSPPRFMEEYREFESSGPYRRDTSIGVRPSET
GVVDTVVMTQSNEGGKMYKIRVRDMRIPEIGDKFASRHGQKGVLGILAKAEDLPYTADGI
SPDVLINPHAFPSRMTVGMFMESICGKAAALRGSQFDGSAFVGEKMDEVKPVMDAAGFKY
SGKETMYDGRTGKSFPVDVFIGVVYYQKLHHMVADKIHARARGQVQMLTKQPTEGRARGG
GLRFGEMERDCLIAYGASMILKDRLLDESDKSDIFVCERCGLVAYHDVKQRKYICRVCGD
KAKVSSVSVAYAFKLLLQEMQSLNVAPRLLIKEKV
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccttcagttaaacgttggccaataattcaagatatcttgaaacgtgaaggt
attgcacgtcaacatcttaattcttttgatgaatttttagaaagaggtcttcaaagtatt
atcaacgaagtagggcaaattgaaattgaaaatgctgaatatccctacaaaatacaacta
ggtaaagtcaaactacaacaaccaagaatgatggagcttgatggttctatcactcatatc
actccagcagaagctagactaagaaatgtttcatattcggcacctgtaatgatggaagca
agtgttgttgaagatggaaaaatcttagaatctagatttgtccatattggcgatgtacct
gtaatggcaaaatcaaacgcttgcattttacataatttttcaacacaaaaattagttgaa
catggcgaggatccaaatgatcccggcggttattttattattaatggttctgaaagagtt
attgtaggattagaagatctttcctacaacaaaataattgttgacagagaaagtgtgggt
ggaaatacagttttcaaagctaaagtttattcttcaattgttggttatcgagcaaaacta
gaattggtaatgaaaaacgatggtttgattgtagctagaattcccggttctcctgttgac
attcctgttgttacactaactagagcacttggattagaatctgatagagagattgcagct
gctgtttcacttgttgatgaaattcaaaatgaattagaaggttcatttgaaaaagcaggt
gacgttccaacagcaaaagatgcaattgtttacatcagtaaaagaatcgctcctggaatg
ttagaggaattccaaatcaaacgagcagagactcttttagattggggcttattgccacac
ttgggtaaacatccagagaatagaaaagaaaaagcacaatttcttggtgaggctgcatgt
aaattattagaacttaaacttggttggatctcaccagatgacaaagatcattatggaaat
aaagtaatcaaatttgcaggacaaatgttagctgatctatttagaactgcatttagaaat
ttggttcgagacatgaaataccaattagaaagatctggtcaaaaaagaggcattaacgca
gtagcggcagcaattcgtccaggtattattactgataaattaaacaatgcaattgcaacc
ggaaactggggtagaggacgtgttggtgtaactcaattactagatagaacaaactacctt
tcaactattagtcatcttagaagaattcaatctcctcttagtagaactcaaccaaacttt
gaggcaagagatttacacgctacacactttggaagaatttgtcctagtgaaactcctgaa
ggttctaactgtggtctagtaaagaacttggcgctttctggaattatttctgtaaatgtt
ccatccgaagaaattgttgagaaattatatgatcttggaacaattcacttctttgatgca
aaagaagatgtgaaaaaagacggagctagaatatttgttgatggtagattaattggctat
tacaaagatggtgctgaactagcagaatcactaagagaattaagaagaaattcaaaaatt
catcctcatgttggaatatcatttcatcaatctgccattgaaggttctacaaaacgactt
tatgttaattgcaatgcaggacgtgttttacgtccattgataattatcaaagataacaaa
cccttgctcacacaagacctattggataaaatctccaagaaacttctttcatggactgac
ttgttgcgcatgggagtcttagaaatgattgatgccaacgaagaagaaaattgctatatt
acattagatgaaaaagattcaaagaaacatacacatcttgaagtatttccaccagcaatt
cttggtgcaggtgcttctataattccatatccggaacataatcaatctccaagaaacaca
tacgaatctgcaatggcaaaacaaagtttaggattttcaactccaatgatgaataccagt
acttatgtcagacaacatttgatgttgtacccacaaacacctattgttaatactaaagca
atgaaattactaggattagaagatagacccgcaggacaaaactgtgttgtggcagtattg
ccatttgacggttataatattgaagacgcaattgtactaagtagatcatcagttgacaga
ggtctcggaagaacattcttctttagaatttatgatgcagaagcaaaacaatatcctggt
ggaatgcgtgatgcttttgaaattccaaacgctgaagacaacattcgtggttacaaaggt
gaaaaagcttatcgattattagaagaagatggagtagttgcatctgaatctccagttcat
ggtggagatattttaattggaaaaacaagtccaccacgatttatggaagaatatagagaa
tttgagtcatctggaccctacagaagagatacctcaattggtgtcagaccgtctgaaacc
ggtgttgttgatactgttgtaatgacacaatcaaacgaaggtggaaagatgtacaagatt
agagttagagatatgagaattcctgaaattggtgacaaatttgcatcaagacatggacaa
aaaggtgtcttgggaattttagcaaaagctgaagacttgccatatactgctgatggaatt
tcaccagacgttttgattaatccacacgcattcccatcaagaatgactgtaggaatgttc
atggaatcaatttgtggtaaggctgcagcactaagaggaagtcaatttgatggctctgca
tttgtaggagaaaaaatggatgaagttaaacctgtaatggatgctgctggattcaaatat
tctggtaaagaaacaatgtatgatggaagaactggtaaatcatttccggtcgatgtcttc
atcggagtagtatattatcaaaaattacaccacatggttgcagataagattcatgcaaga
gcacgtggacaggttcagatgttaactaaacaaccaactgaaggaagagccagaggtggt
ggtttaagatttggtgagatggaaagagattgtttgattgcatatggtgcatcaatgatt
cttaaagatagattgctagatgaatctgataaatctgatatttttgtctgtgagagatgt
ggattagttgcatatcatgacgtaaaacaaagaaaatacatctgcagagtttgtggtgat
aaagctaaagtttcatcagtatctgttgcatatgcattcaaacttttgttacaagaaatg
caaagtttgaatgtggctccaagattactcattaaggagaaggtataa
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