Nitrosarchaeum sp. AC2: DSQ20_02010
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Entry
DSQ20_02010 CDS
T06694
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
nic
Nitrosarchaeum sp. AC2
Pathway
nic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSQ20_02010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nic03021
]
DSQ20_02010
Enzymes [BR:
nic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSQ20_02010
Transcription machinery [BR:
nic03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DSQ20_02010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RIP_P131-like
Motif
Other DBs
NCBI-ProteinID:
QLH10408
LinkDB
All DBs
Position
366267..370058
Genome browser
AA seq
1263 aa
AA seq
DB search
MSIQAIKTIDAIRFSVWSPTEIRKYSVAEITAPETYDEDGMPVQGGLMDGRLGTLEPGQK
CLTCGNTAARCPGHFGHIELAEPVLHIAFIDNIYKLLQSTCRSCARLKVPQEDLEEFRKI
KEKHAAYTVISEKRIPEQIIEKAKKAKECPHCGKTQYELIFTKPTIFVEKTEIGEHRLLP
ITIRERFTQIIDDDLNLLSYDPVTARPEWFILQALPVPPVTVRPSIILETGIRSEDDLTH
KMVDIIRVNQRLKESKEAGTPPLIVQDLVDLLQYHTTTYFDNEVSGIPQAHHRSGRPLKT
LTQRLKGKEGRFRGSLSGKRVDFSSRTVISPDPNLDLSEVGVPEQVAMKLTIPEIVTEWN
IERMRTLVINGPNKFPGVNYIVRPDGVKIRLDFVEDRSTIAETLEIGYLVERHLANGDIV
LFNRQPSLHQMSIMAHYVRVLPGKTFRLHPSVCPPYNADFDGDEMNLHVPQSEEARAEAI
LLMRVQDQLISPRYGGPIIGALRDFVTGAYLLTKDDTVLTPQEFYNYAMLGGYTDKLPKP
ATKTKDGLMYTGKQLFSLFLPKDFNYVITSKWSKGTKGAQKDVVIKNGELLSGVIDKSSI
GAEEPESVLHRIAKDYGNTKAKNFLNSILIMVKQYITHYGFSYGYADLEVPEKEKQQILD
DIQETYGIISDLTSQYEKGTLKLTRGMRPEEALEAYIVNELGKARDKAGMTADQSLDQSN
AGRIMATTGARGSALNIGQMAGALGQQSRRGSRLHAGYNNRALPHYQEHDKNPDAHGFVK
SNYREGLSALEFFFHAMGGREGLVDTAVRTQQSGYMQRRLINALEHIRLEYDGTVRDPHG
HIIQFLYGEDGIDVAKSDHGEAFNVNRLIESQIIVDSGKKATKEEITELTKKYTKTFNPR
LKELVSEGLLDSKLSKEGAEIVCKKGLSLYNKAKVEPGQAVGIITAQSIGEPGTQMTLRT
FHFAGIAERNVTLGLPRLIELVDARKKPVTPTMDIYLDNESKKSREKAIDIARNVLQTKV
SALISDSETDYTSQIKLILSANRLKERGCTVSEVEAALQSNKKFKIETTGDLITLKLVDE
SDAPTVIAIRNKVLNTTVKGVPDIERVTLVQKDDEWVIQTTGSNIAKVLEVQGIDKKNVR
TNNVFEIAGTLGIEASRNALINELKNTLEDQGLEVDNRYIMLVSDLMCSRGYMQQIGRHG
IAGTKDSVLARAAFEITVPTIAHAALAGEVEQLKGITENVIVGSMIPIGSGTVDLYMQVS
KKK
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcaagcaattaaaacaattgatgcaattagattttcagtttggtctccaact
gaaattagaaaatattctgtagcagaaattacggctcctgaaacatatgatgaagatgga
atgcctgtacaaggaggtcttatggatggtagacttggtacacttgaacctggacagaaa
tgtctaacatgtggaaatactgccgctagatgccctggtcattttggtcatattgaactt
gcagaacctgttttacatattgcatttattgataatatttacaagctattacaatcaact
tgtcgttcttgtgcaagactcaaggtcccacaagaagatttagaagaatttagaaaaatc
aaagaaaaacatgctgcttatactgtaatttctgaaaaacgtattccagagcaaattatt
gaaaaagcaaaaaaagcaaaagaatgtcctcattgtggtaaaacccaatacgagctaatc
tttacaaaacctactatctttgttgaaaaaacagagattggtgaacatagattattacca
attacaattagagaaagattcactcaaattattgatgatgatcttaacttattatcatat
gatcctgtgactgcaagaccagaatggtttattttacaagcactacctgttccacccgta
actgtaagaccctcaattattcttgaaactggaattcgttctgaagacgatttaacgcat
aagatggtagatattatcagagttaatcaaagactaaaagaaagtaaagaagcaggaacg
cctccgttaattgttcaggatttagtagatttgttacaatatcatacaaccacatatttt
gataatgaagtatctggtattccacaagctcatcaccgttcaggacgtccactaaaaaca
ttaactcaaagattaaaaggaaaagaaggaagattcagaggttcactttctggaaagaga
gtagatttctctagtagaactgtaatttcacctgatcctaacttggacttgtctgaagta
ggagttcctgaacaagttgcaatgaaattaacaattcctgaaattgttactgaatggaat
attgaaagaatgagaacacttgtaattaatggaccaaacaaattccctggtgttaattat
atcgtaagaccagatggtgttaaaattagattagattttgttgaggatcgttctacaata
gctgaaacattagaaattggatatcttgtagaaagacatcttgctaatggtgatattgtc
ttgtttaaccgacaaccatctcttcatcaaatgtcaattatggctcactatgtgagagta
ttgccaggaaaaactttcagattacatccatctgtttgtcctccatacaacgcagatttt
gatggtgacgaaatgaaccttcacgttcctcaaagtgaagaagcaagagcagaagcaatt
ctcttaatgagagttcaagatcaattaatttcaccaagatatggtggtccaattattgga
gctctaagagactttgtcactggcgcttatcttttaactaaagatgatactgttttgact
ccacaagaattttacaattatgctatgcttggtggatatacagataaacttccaaaacct
gcaacaaaaactaaagatggtttgatgtatactggtaaacaattattctcattattctta
ccaaaagatttcaactatgtcattacatcaaagtggtcaaaaggaaccaaaggcgcacaa
aaagacgttgtaattaaaaacggtgaattacttagtggtgtaattgataaatcttcaatc
ggtgcagaagaaccagaaagtgtgttgcatagaattgcaaaagactatggtaacacaaag
gcaaagaactttttgaattctattctaattatggtaaaacaatacattactcattatgga
tttagctatggttacgcagatcttgaagtacctgaaaaagagaaacagcagattcttgat
gatattcaggagacatatggtatcatatctgatcttacttctcaatatgaaaaaggaact
ctaaagcttactagaggaatgagacctgaggaagcactagaagcatacattgtaaatgaa
ttgggaaaagcaagagacaaagctggtatgactgcagatcaatcccttgatcaaagtaat
gctggaagaattatggctacaactggtgcaagaggttcagcacttaacatcggtcagatg
gcaggtgcattaggacaacaatcaagaagaggaagtagattacatgctggttacaataat
cgtgcattaccacactatcaagaacatgataaaaatcctgatgcacatggttttgttaaa
tcaaattacagagaaggactttctgcacttgaattcttcttccatgcaatgggaggtaga
gaaggtcttgtagatactgcagttagaacacaacaaagtggatacatgcagcgtagactt
atcaacgcattagagcatattagattagaatatgatggaactgtaagagatccacatggt
cacatcattcaattcctttatggcgaagatggaatagatgttgcaaaaagtgatcatggt
gaagcattcaatgttaatagattaatcgaatcacaaatcattgttgattctggaaagaag
gcaacaaaagaagaaattactgaattaacaaagaaatacacaaagacattcaatcctaga
ttaaaggaacttgtatctgagggattacttgattcaaaattaagtaaggaaggtgcagaa
attgtttgtaagaaaggtctatcattatacaacaaagccaaagttgaaccaggacaagca
gtaggaattatcactgcgcagtcaattggtgaacctggtactcagatgactctaagaaca
ttccactttgcaggaattgcagaaagaaacgtaactttaggtcttccaagattgattgaa
cttgttgatgcaagaaagaaacctgtcacaccaacaatggatatttatcttgataatgaa
tccaaaaaatcaagagaaaaagcaatcgatatcgcaagaaatgttttgcaaactaaagtg
agtgcattaatctctgatagtgaaactgattacacatctcaaattaaattaattcttagt
gcaaacagactcaaagaaagaggatgtactgttagtgaagtagaggcagcattacaatca
aacaaaaaattcaaaatcgaaacaactggagatctaatcactctaaaactagtagatgaa
tctgatgctccaactgttattgcaattagaaacaaagtactcaataccactgtaaaggga
gtcccagacattgaacgtgtaactctagttcaaaaagacgacgaatgggtaattcaaaca
actggttccaatattgccaaagtacttgaagttcaaggaattgataagaaaaatgttaga
acaaacaacgtgtttgaaattgcaggtacattaggaatagaggcatctagaaatgctttg
ataaatgagctgaaaaatactttagaagatcaaggtctggaagttgataataggtatatc
atgttagtgtctgatttaatgtgctcaagaggatatatgcagcaaattggtagacacgga
attgctggtactaaagatagtgttcttgcaagagcagcatttgaaattacagttccaaca
attgcacatgctgcattagctggtgaagttgaacaactcaaaggtattactgaaaacgta
attgttggtagcatgattccaattggaagtggaaccgtagatctttacatgcaagtaagt
aagaagaaatga
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integrated database retrieval system
