Nitrosarchaeum sp. AC2: DSQ20_02165
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Entry
DSQ20_02165 CDS
T06694
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
nic
Nitrosarchaeum sp. AC2
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DSQ20_02165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nic03021
]
DSQ20_02165
03019 Messenger RNA biogenesis [BR:
nic03019
]
DSQ20_02165
Transcription machinery [BR:
nic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
DSQ20_02165
RNA polymerase I system
DSQ20_02165
Messenger RNA biogenesis [BR:
nic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
DSQ20_02165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Beta-barrel_RND_rel
KOW5_SPT5
KOW4_SPT5
Motif
Other DBs
NCBI-ProteinID:
QLH10436
LinkDB
All DBs
Position
complement(391952..392410)
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AA seq
152 aa
AA seq
DB search
MSEEVKSHLFAIRTTGGQEKVVMRLLEAKASNNKMNIQSVLLVDNLKGYVVIEAINPSDA
YMAVEGIRHIRGQLRGELEFKDIEGYLVKKSTVSQLTVDNIVEITGGPFKGMKATITRID
VDKEEATVVLLDASYQLPVTVDANYLKLSSES
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaagtaaaatcacacctttttgcaataagaaccactggaggtcaagagaaa
gtggtaatgagattacttgaagctaaagcaagtaacaataagatgaatattcaatccgta
ttactagttgataatctaaagggatacgttgtcattgaggcaattaacccaagtgatgca
tacatggcagttgaaggaatcagacatattcgcggtcaactaagaggagaattagaattc
aaagatatagaaggatatctggtaaagaaatccacagtttcacaattaacagtagataac
atagttgagatcactggcggtccattcaaaggaatgaaagccacgatcacaagaattgat
gtagacaaagaagaagcaacagtagtcttacttgatgcatcatatcaattgccagtaact
gtcgacgccaactacctaaaactatctagtgagtcttag
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