Nitrosarchaeum sp. AC2: DSQ20_02860
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Entry
DSQ20_02860 CDS
T06694
Name
(GenBank) transcription factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nic
Nitrosarchaeum sp. AC2
Pathway
nic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSQ20_02860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nic03021
]
DSQ20_02860
Transcription machinery [BR:
nic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DSQ20_02860
Prokaryotic type
Archaeal type
TFB
DSQ20_02860
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Auto_anti-p27
Cyclin_C
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
QLH10552
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Position
complement(499039..499995)
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AA seq
318 aa
AA seq
DB search
MNILQTQSCPECKSSLVDDIQNGEIICSGCGVVVADQMVDYGPETKSSNLEDKMKLARAT
GQTTYSQHDLGITTEISISTKDFSGKTINHQVANQMHNLRKWQQRVRVSSPRERRLANVL
SKMGETCDGLNLSKNVLETASMIYRNLDGHVEVKGKSVSSITAATIYMACKQCDVVRSLE
EICRGICAPKDVKSKTKLAAKYYRTMVMEMGQISAPVVTMNKYISKIANMTQTEVRVERL
ALEIAEKTKDSNIADGKAPNGIAAAYLYVASVLLGQNVLQRDVSSIAGVTEVTIRNRCKE
ILTCYKLKITLRPSLAKF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacatattacaaacccaaagctgtcctgaatgtaaatcatcattagtagatgacatt
cagaatggtgaaataatctgctctggttgcggcgtagttgttgcagatcagatggtagat
tatggtccagaaacaaagagctcaaatctcgaagacaagatgaagctagcaagagcaaca
ggacaaacaacttattctcaacatgatttgggaataacaactgagatatcaattagcaca
aaggactttagtggaaaaacaatcaaccatcaagttgctaatcaaatgcacaatctcaga
aaatggcaacaaagggtacgcgtttcttcaccaagagaaagaagattggcaaatgtttta
tcaaaaatgggtgagacatgtgatggtctaaatctttcaaaaaatgtcttggaaacagct
tctatgatttacagaaacttggatggacatgtagaggtaaaaggaaaatctgtatcaagc
attacagctgctacaatctacatggcatgtaaacaatgcgacgttgtaagatcattagaa
gaaatttgtagaggaatatgtgcaccaaaagatgtcaagtcaaaaacaaaacttgcagca
aaatactatagaaccatggtaatggaaatggggcaaataagcgccccagttgttactatg
aacaaatacatctcaaagattgcaaacatgacacaaactgaagttagagttgaaagacta
gccttagaaatagcagaaaaaactaaagacagtaatattgcagacggaaaagcaccaaac
ggaattgcagccgcgtatctgtatgtagcctcagttttgttaggacaaaatgtccttcaa
agagacgtctcaagtattgcaggtgtcacagaagtaacaatcagaaacagatgtaaagag
attctaacatgctataaactcaaaattactttgagaccgtctctggccaaattttaa
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