Nitrosarchaeum sp. AC2: DSQ20_04300
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Entry
DSQ20_04300 CDS
T06694
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
nic
Nitrosarchaeum sp. AC2
Pathway
nic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DSQ20_04300 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nic03019
]
DSQ20_04300 (prf1)
03012 Translation factors [BR:
nic03012
]
DSQ20_04300 (prf1)
Messenger RNA biogenesis [BR:
nic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
DSQ20_04300 (prf1)
Translation factors [BR:
nic03012
]
Eukaryotic type
Release factors
DSQ20_04300 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
baeRF_family10
acVLRF1
RNA_pol_Rpb1_6
Motif
Other DBs
NCBI-ProteinID:
QLH10778
UniProt:
A0A7D5ME10
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Position
complement(740367..741659)
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AA seq
430 aa
AA seq
DB search
MEKINIEKVDSVKLYKIRKMLEELSQKSGRGTELISVYIPKGKQLHEIISTLQQEQGTAD
NIKSDLTRSHVVDSLGKVVQRLKLLKKTPDRGLVMFCGALPPEGGGPLGSEVVKVWEIDP
PKDLKQYLYRCDDHFHVDILKDMLKDDNLIGFLAIDAKDAGWGLLHGDKIEVLSQTGSGV
AGKHRQGGQSAKRFQKLREMELSYFYNRVAGTTREYFIDIYPVKGLIISGPGPTKEDFIN
GNYLEYRLQNMIINTLDCGYSGAEGIREAFAKSAELLSDFRMVEEKKLIEDLFREVNSHS
GLGVYGLQDVIELLKNNVVKTLIITDDTNLNRVEGKCRRCQNIQEIIVERRDVIPKKTEY
SSKPCPACNAMEVEPNEQDIVDYLELLAAKTGSKLEVVSGSAEHGAMLSSLGKVGAILRY
NPGHTKEAKT
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcaacatagaaaaagtagattctgttaaactttataaaattagaaaaatg
ttagaagaactttcccaaaaatcaggacgagggacagaattgatcagtgtatatatccca
aaaggaaaacaactacacgaaattataagcaccttacaacaagaacaaggaactgcagac
aacatcaaatcggatttgacaagatcacatgtagtagattcattaggcaaagtagttcag
agattaaaactactcaaaaaaacaccagatagaggactagtgatgttttgtggagcactg
ccacctgaaggaggaggtcctttaggaagcgaagtggtaaaggtatgggaaattgatcct
ccaaaagatttgaaacagtatctttacaggtgtgatgatcattttcatgtagacattcta
aaagacatgttaaaagatgataatctgattggctttttagctattgatgccaaagatgcc
ggatggggattattgcatggcgacaaaatagaagtactttcacagacaggctctggagta
gcaggtaaacacagacagggaggacagtctgcaaaaagattccaaaaattaagagagatg
gagctttcatatttttacaacagggttgccggaacaacaagagaatattttattgacatt
tatcctgtaaaaggattaataatttcaggccccggacctacaaaagaagattttatcaat
ggaaattatttagaatatagattacagaacatgatcatcaatacactagattgtggatat
tctggagcagagggaattagagaagcatttgcaaaatctgccgaacttttatcagatttc
agaatggtagaggaaaagaagttaattgaagacttgtttagagaggtaaactcccattca
gggttaggagtatacggattacaagatgtgattgaacttttgaaaaataacgtagtaaaa
actttgatcataacagatgatacaaacttaaatcgagttgaaggaaaatgccgcagatgt
cagaatattcaagaaataattgttgaaagaagagacgtcattccaaaaaaaacagaatat
tcaagcaaaccttgccctgcatgcaatgcaatggaagttgaaccaaatgaacaagacata
gtagactatttggaacttcttgctgccaaaacaggaagcaaattagaagtagtttcagga
agtgcagaacatggagctatgttatcaagcttaggtaaagtgggtgccatacttcgatac
aacccagggcatactaaagaagcaaagacttga
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