Nitrosarchaeum sp. AC2: DSQ20_05835
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Entry
DSQ20_05835 CDS
T06694
Name
(GenBank) TATA box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
nic
Nitrosarchaeum sp. AC2
Pathway
nic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSQ20_05835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nic03000
]
DSQ20_05835
03021 Transcription machinery [BR:
nic03021
]
DSQ20_05835
Transcription factors [BR:
nic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
DSQ20_05835
Transcription machinery [BR:
nic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DSQ20_05835
RNA polymerase III system
TFIIIB
DSQ20_05835
RNA polymerase I system
SL1/TIF-1B
DSQ20_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
QLH11042
LinkDB
All DBs
Position
complement(992734..993297)
Genome browser
AA seq
187 aa
AA seq
DB search
MPQSKPIISVVNVVASASVDQKIDLNDITKKFPDTEYNPDQFPGLVFRLQNPKTATLIFR
TGKMVCTGGKSEEMAIKAVNTVVQKLRKGGIKVKKDAEITVQNIVASINLGGKVHLEKAA
RTLPRSMYEPEQFPGLIHRMLDPKTVILIFSSGKLVCTGAKNESDVFRSVHNLHALLEEK
NLMIYDQ
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaatcaaaaccaatcattagtgttgtaaacgtggttgcatctgcatctgtggat
caaaaaatcgatctaaatgatattactaaaaaatttccagatactgaatacaatccagac
caatttccaggattggtctttagactacaaaatccaaaaacagcgactcttatctttaga
accggaaagatggtatgcactggtggaaaatccgaagaaatggccattaaggcggtaaat
actgttgtccaaaaacttcgaaaaggtggaattaaagtaaaaaaggatgcagaaattaca
gttcaaaatatcgtagcttcaattaatctaggtggaaaagtgcatcttgaaaaagctgct
agaaccttacctagaagcatgtatgagccagaacaatttccagggttaatccatagaatg
ttagacccaaaaactgtcatattgatattttcatctggaaaacttgtttgtactggagca
aaaaatgaatctgacgtatttcgttctgttcataacttacatgcattactagaagaaaaa
aatctaatgatatatgatcaatag
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integrated database retrieval system
