Nitrosarchaeum sp. AC2: DSQ20_06845
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Entry
DSQ20_06845 CDS
T06694
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
nic
Nitrosarchaeum sp. AC2
Pathway
nic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSQ20_06845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nic03400
]
DSQ20_06845
DNA repair and recombination proteins [BR:
nic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSQ20_06845
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSQ20_06845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND3
RsgA_GTPase
AAA_14
nSTAND1
AAA_21
AAA_25
AAA_23
NB-ARC
Viral_helicase1
AAA_33
DnaJ_CXXCXGXG
AAA_22
cobW
MeaB
Motif
Other DBs
NCBI-ProteinID:
QLH11204
UniProt:
A0A7D5M9X2
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Position
complement(1159165..1161981)
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AA seq
938 aa
AA seq
DB search
MAENKLKIRGARHHNLKNIDVDIPKNKLVVISGLSGSGKSTLAFDTIYAEGQRRYVESLS
AYARQFLEMMDKPDVDSIEGLSPAISIQQKTTSKNPRSTVGTTTEIYDYMRLLFARIGIP
YCVNCLRKISSQSVETICDSILRDFADQKILILSPIVQRKKGTYEKLFEQIKKDGYSRIR
LNGEILSLDEPISPLDRQKWHNIEIVVDRIQAEKSERSRLFEAIQTAIKASKGDVMVSSD
KSEKIFSQNNACPYCGLTIGELEPRTFSFNSPFGMCKACNGLGVKMEFDEDLVIPDKSKS
ILDGAIVPWSGRFSAFRKQALRAVGKKFGFDLMTPIEKISLKHLKIILYGSNDLIDFKYQ
SKSGDSSWQYTDAFEGVLVNLQRSFMETDSESKREWLKQFMRDTPCTACNGKKLKPESLA
VKINDKGIMDVCDLSIDHCYDFFSTLQLTENEQYIAKDVLKEIKERLEFLMNVGLNYLTL
NRLSSTLSGGESQRIRLATQIGSNLTGVLYVLDEPTIGLHQRDNERLIKTLTKLRDLGNT
VIVVEHDEEIMRNSDWIIDLGPGAGVHGGNVVFEGTVKQILHNKKSITGEYLKNNSLIKL
DGKIRNRSGTLVIKGASENNLKSIDVEIPLGLFVSVTGVSGSGKSTLINDILLKSLENYF
YKSNIKSGSHSGISGLEYIDKVIAIDQSPIGRTPRSNPATYIGAFTPIRELYANTELAKE
RGYSLGQFSFNVADGRCFACEGDGVKQIEMQFLSDVYVKCDECKGKRYNSETLSVLYKGK
NISDVLNMTVYEALQFFENIPSIKRKLQTVYDVGLGYIKLGQSSTTLSGGEAQRVKLASE
LSKRGTGKTFYILDEPTTGLHFADVQKLLDVLNRLVNLGNTVLVIEHNLDVIKNSDWLID
LGPEGGDEGGKIVTVGTPEQVSKAPGSYTGKYLKKLLK
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaataaattaaaaattcgtggtgcaagacaccataatttaaaaaatattgat
gtagacattccaaaaaataaactcgttgtaattagtgggttatctggttctggaaaatca
actttagcttttgatacgatttatgctgaaggacagagacgttatgttgaatctctttct
gcatatgcaagacaatttcttgaaatgatggacaaacctgatgttgattctattgaaggt
ctttcacctgcaatatctattcaacaaaaaacaacaagcaaaaacccacgttctactgtt
ggcaccactactgaaatttatgattacatgagactactttttgcaagaattggaattcct
tattgtgtgaattgtttacgaaaaatttccagtcaatccgttgaaacaatatgtgattct
attctcagagattttgctgatcaaaagattttgattttatctccaattgttcaaagaaaa
aaaggaacgtatgaaaaattatttgaacagataaaaaaagatggatactctagaatacgc
ctaaatggggaaattttaagccttgatgagccaatttctccacttgatagacaaaaatgg
cataatattgagattgtagttgatagaattcaggcagaaaaatctgaaagatctagactt
tttgaagcaatacaaactgcaataaaagcatcaaaaggtgatgttatggtttcttctgat
aaatctgaaaagatattttctcaaaataatgcttgcccttactgtggtttgacaattggt
gagctagaaccacgaaccttctcatttaactccccatttggaatgtgtaaagcatgtaat
ggtttgggagtgaagatggaatttgacgaagatcttgtaattccagataaaagtaaatca
attttagatggcgcaattgttccctggagtggaagattttctgcatttagaaaacaagcg
ttaagagctgttggtaaaaaatttggttttgatttaatgacccccattgaaaaaatatct
ctaaaacatcttaaaattattttatatggctcaaatgatttgattgattttaaatatcaa
tcaaagtctggtgattcatcttggcaatacactgatgcctttgaaggagtacttgtcaat
ctccagcggtcatttatggagaccgattctgaatctaaacgtgaatggctaaaacaattc
atgcgagatactccttgcactgcatgtaatggaaaaaaattaaaaccagaatcgcttgca
gtaaaaatcaatgataaaggaataatggatgtatgtgacttgtccatagatcactgctat
gattttttttctacattacaattaactgagaatgaacaatacatcgccaaagacgtacta
aaggaaatcaaagaacgattagaatttctaatgaatgtggggttaaactatcttacattg
aatagattaagctcaacactatctggtggagaatctcagcgaattagattggcaactcaa
ataggttctaatcttactggtgtcttgtatgtacttgatgagccaacaattggattacat
cagcgtgataatgaacgcctcattaaaacgctaacaaagctgcgagatttaggaaataca
gtcattgttgtagagcatgacgaagaaattatgcgaaattcggattggattattgatttg
ggtccaggtgccggagttcatggcggtaacgtagtatttgagggaactgtaaaacaaata
cttcataataaaaaatctataacaggagaatatctaaaaaataattctcttataaaactt
gatggaaaaattcgtaatcgttctggaactctggtaattaaaggcgcatctgaaaataat
ttaaagagtattgatgttgaaattcctcttggtttgtttgtttcagtaactggtgtctct
ggttctggaaaatccactctgattaatgatattttattaaaatcccttgaaaattatttt
tataaatccaatattaaatctggatctcatagtgggatttcaggtcttgaatatattgat
aaagttatagcaattgatcaatccccaattggtagaactcctcgttctaatcctgcaact
tacattggtgcctttactcctattagagaactatatgcaaatactgagttagcaaaagaa
agaggatattctttgggacaattttcttttaatgtggctgatggaagatgttttgcatgt
gaaggcgatggtgtaaaacaaatagagatgcagttcttgtctgatgtttatgtaaaatgt
gatgaatgtaaaggaaagcgttacaattctgaaacgctttcagttttgtataaaggaaaa
aatatttctgatgttttgaatatgactgtctacgaagcgcttcaattttttgaaaatatc
ccttcaattaaaagaaaactacaaaccgtctatgatgttggattgggatatataaaattg
ggacaatcatcaactacattatctggcggagaggcccaaagagtaaaacttgcatctgaa
ttatcaaaaagaggaactggaaaaacattttacattcttgatgagcctactaccggatta
cattttgctgatgttcaaaaactacttgatgttctaaacagattggtgaatttaggaaat
actgtattggtaattgaacataatttggatgtgattaaaaattctgattggttaattgat
ttgggaccagagggtggtgatgaaggtggtaagatagtgactgttggaactcctgaacaa
gtttcaaaagctcctggaagttatactggaaaatatcttaaaaaattactcaaatga
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