Nitrosarchaeum sp. AC2: DSQ20_07610
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Entry
DSQ20_07610 CDS
T06694
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nic
Nitrosarchaeum sp. AC2
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nic03016
]
DSQ20_07610
Enzymes [BR:
nic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DSQ20_07610
Transfer RNA biogenesis [BR:
nic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSQ20_07610
Prokaryotic type
DSQ20_07610
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GFIT
Motif
Pfam:
TruD
DUF863
Motif
Other DBs
NCBI-ProteinID:
QLH11339
UniProt:
A0A7D5MF30
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Position
complement(1277425..1278621)
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AA seq
398 aa
AA seq
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MIPKIDSQIGILVYSTKFNGIGGRIKDEAEHFKVNEVLSPKSLKSIIQQDGYAVYKLKKK
KIDTNHALSDIFKKTGIRLKSLGLKDASAVTEQFVCSDSKSKSIDNYSSEKYSLEKIGHV
KKPLSKKDMIGNHFSIKISDCVGNLSDFAEYDKILNFYGYQRFGSKRAVTHLIGKALLQR
NFKKAVDLLLSFTSTYDSKENTEIREKLADPSNYKKYLDQVPPQMDVERIVLQEMIEHDD
SQKAIHAVPLPLRRFYVQAYQSFLFNHALSAAFTDGENLFAAQEGDVCYDSHGIIGKYVK
GLDQFLALPFVGYSYYKKTRFDFQISKILQTEEITPKDFFIKEMQEISSEGGFRQAAIQC
TDHFSKDTTVEFTLSRGSFATIVLREIMKPEDPLGSGF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgataccgaaaatagattctcaaataggaatcttagtttatagtacaaaatttaatgga
attggcggacgaattaaagatgaagctgaacactttaaagtaaatgaagtactctctcca
aaatcacttaaatcaattatccaacaagatggttatgctgtatacaaactaaaaaagaaa
aaaatagacaccaaccacgcattatctgatatttttaaaaaaacaggaatcagattaaaa
tcacttggattaaaggatgcatctgcagttactgaacaatttgtttgctctgatagcaaa
agtaaatccattgataattattcttccgaaaaatattctcttgaaaaaatcggccatgta
aaaaaacctctatcaaaaaaagatatgattggtaatcattttagcattaaaatttcagac
tgtgttggaaatttatctgactttgcagaatatgataaaattctaaatttttacggttac
caacgatttggctctaaaagagccgtaactcatcttattggtaaggctcttttgcagcga
aatttcaaaaaagcagtcgatttactcctatcttttacctctacttatgattctaaagaa
aataccgagataagagaaaaacttgcagacccttcaaattacaaaaaatacctggaccaa
gttcctccccaaatggatgttgaaagaatcgtactccaagaaatgattgaacatgatgat
tcacaaaaagcaatacatgcagtaccactacctttacgaagattttacgtccaagcttac
caatcttttctttttaatcatgcattaagtgccgcatttactgacggtgaaaatctcttt
gctgctcaagagggtgatgtttgttatgactctcacggaattattggaaaatatgttaaa
ggactagatcagtttcttgctttgccttttgtaggttattcgtattacaaaaaaactcgc
tttgattttcagatatccaaaattctacagactgaagaaatcactcccaaagattttttc
atcaaagagatgcaggaaattagtagtgaagggggatttagacaagctgcaattcaatgt
acagatcatttctcaaaagatactacggtagagtttactttatctcgaggttcatttgct
actatagttcttcgtgaaattatgaaacctgaagatccactaggatctggattttga
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