Nitrosarchaeum sp. AC2: DSQ20_09120
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Entry
DSQ20_09120 CDS
T06694
Name
(GenBank) RNA-binding protein
KO
K07573
exosome complex component CSL4
Organism
nic
Nitrosarchaeum sp. AC2
Pathway
nic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSQ20_09120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nic03019
]
DSQ20_09120
Messenger RNA biogenesis [BR:
nic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DSQ20_09120
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
DSQ20_09120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
Ribosomal_L37e
DUF6929
DUF6910
RRP4_S1
DUF7464
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QLH11578
UniProt:
A0A7D5MEJ8
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All DBs
Position
1541487..1542038
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AA seq
183 aa
AA seq
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MSEIAALPGDKIASIEEYETGYNTFDDGDMVRASTVGKTELDKEARVANIKHPKMISIPK
VGDIIIGTVAAVMSSMIAVSIDYINGKPTTSKVECICSTRNLRKKNVALVNDIVTLKILN
HLNGTIHATIEEPHLGVLFTKCRKCGKKVVQMRDAIKCTECSWIDERKLSTNYGNSDFVK
LRE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaattgctgcacttccaggagacaaaatagcatctattgaagaatatgaaaca
ggctacaatacttttgatgacggagatatggtccgtgcatcaactgtaggtaagacagaa
ctggacaaagaagctagagttgcaaacataaaacatccaaagatgatatcaattcctaaa
gtaggagacatcattattggaactgtagcagcagtaatgtcttctatgatagcagtatca
attgattacattaatggtaaaccaaccacttctaaagttgaatgtatttgctcaacaaga
aatcttagaaaaaagaatgttgctttggtaaacgatattgttacactaaaaattttgaat
catctaaatggtacaattcatgcaacaattgaggaaccacatttgggcgtattatttaca
aaatgtagaaaatgtggtaaaaaagtagtccagatgcgcgatgccataaagtgtacagaa
tgttcttggattgatgaaagaaaactttcaacaaattacggtaatagtgatttcgtaaag
ctgagagagtaa
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