Nitrosopumilus piranensis: NPIRD3C_0013
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Entry
NPIRD3C_0013 CDS
T03656
Name
(GenBank) HhH-GPD family protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
nid
Nitrosopumilus piranensis
Pathway
nid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NPIRD3C_0013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nid03400
]
NPIRD3C_0013
Enzymes [BR:
nid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NPIRD3C_0013
DNA repair and recombination proteins [BR:
nid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NPIRD3C_0013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
HHH_5
HHH
DUF7277
HHH_8
HHH_2
bHLH_INO2
Motif
Other DBs
NCBI-ProteinID:
AJM91237
UniProt:
A0A0C5C7L1
LinkDB
All DBs
Position
12664..13527
Genome browser
AA seq
287 aa
AA seq
DB search
MKKLLCEMQIKQTIDVENSINSGQVFLWRKNNDFWYGVNGQDVLQINSNGKIESLKNNNT
DFFRNKDNFDEIIKSISKDKTVKTAVEKFAGLRIINQDPFQCIISFIVSSNSNIQKIKKS
LENISEKFGESIEYKNQEFFLFPNAETISKISMNEIKKCGVGYRAKFIKEAAKMISSQKI
VIEDLKTLSYVDAKKKICTIPGIGNKVADCILLFSLDKLEAFPLDRWMIRILEKYYSDKF
QLYTKTITEKQYESLHEKIVDYFGPYAGYAQQFLFKMERENYQKKWL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctgtgtgaaatgcaaataaaacaaacaatagatgtagaaaattcaata
aatagtggccaagtttttctttggagaaaaaataatgatttttggtacggggttaatggc
caagatgttcttcaaataaacagtaatggaaaaatagaatctttgaaaaataacaataca
gatttttttagaaataaagataattttgatgagataattaaatccatttcaaaagataaa
acagtgaaaactgctgtagaaaaatttgcagggttacgaatcataaaccaagatcctttc
caatgcataatttcttttattgtatcttctaattcaaatattcaaaaaattaaaaaaagt
ctagaaaacatatcagaaaaatttggagagagtatagaatacaaaaatcaagagtttttt
ttatttcctaatgcagaaacaatatctaaaatatcaatgaatgaaattaaaaaatgtggt
gttggttatcgtgccaaatttataaaagaagctgcaaaaatgatttcatcacaaaaaatt
gtaattgaggatttgaagacacttagttatgttgatgcaaaaaagaaaatctgtaccatc
cccggaatagggaacaaagtggcagattgtattttgttattttctcttgataaattagaa
gcatttccattagatagatggatgattagaattttagaaaaatactattcagataaattt
caactatacactaaaacaattacagaaaaacaatatgaaagtctacatgaaaaaattgta
gattattttggcccatatgcaggatatgcacaacaatttctctttaaaatggaaagagag
aattaccaaaaaaagtggctgtaa
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