Nitrosopumilus piranensis: NPIRD3C_0250
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Entry
NPIRD3C_0250 CDS
T03656
Symbol
polC
Name
(GenBank) DNA polymerase II large subunit
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
nid
Nitrosopumilus piranensis
Pathway
nid03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NPIRD3C_0250 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nid03032
]
NPIRD3C_0250 (polC)
Enzymes [BR:
nid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NPIRD3C_0250 (polC)
DNA replication proteins [BR:
nid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
NPIRD3C_0250 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolC_DP2_cat
PolC_DP2_central
PolC_DP2_N
zf-DPOE
Motif
Other DBs
NCBI-ProteinID:
AJM91468
UniProt:
A0A0C5BP52
LinkDB
All DBs
Position
complement(232786..236163)
Genome browser
AA seq
1125 aa
AA seq
DB search
MSENDAISRISGIKMPDYYLDYYSNLSAETYSIFEAAASAKSSLVDSSGIIEPKIAFDLA
DRVAKMHEIDIAEPLRELLKINGKELSALILSKEIAQGKYSLPDSTLEEKLDLAVRVGLA
IVTEGVTIAPLQGISEVKIKKNKDGSDYLSVSIAGPMRSAGGTESAVTMLIADHVRKTAG
LSKFQANSFDDETGRFVEELRIYEREASSFQFHILDEDIEHVISNLPVELDGVDTDPYEV
VNHKSMVRIKTDRVRGGALRVLNDGLIGRSKKLLKRIEMYNLDGWEWLNDLKGAVQTGEK
QEDAATKRMHEVITGRSVLSMPNKLGGFRLRYGRACNTGFAAVGIHPVIAEILDHTIAVG
TQIKIDIPGKGSTVAFVDSIETPTVRLKNGNVVKIRDVKHGIEIKNDIEKILHLGDILIS
FGDFLENNAQLVPSAYVEEFWIEELKQKIQKYEPEDQYLTQFLNKVPTIDEALKISLDFD
MALHPRYLYFWDKISSEELNLLLEPKKINETSIEYHIQIKKILEKLGVPHVVENDNIILE
NLEAKIFFNLLFREKPEIDESSIPQIISKSSGIKIKNKFSTSVGVRIGRPEKAAPRQMKP
PTHVLFPISDKGGPTRDLLKASKNEHFFTSIYNRHCTQCNQPSIGIKCSKCGIKTTVTYR
CPHCRDTLEESFCNKCKRNALAYSHKEFPLKSKLLEAQEKIRLRAQEPFKGVKELISQDK
IAEPLEKGLVRQNFGLTVFKDGTVRFDATNSPLTQFKPSWIGTSIEKLKELGYSHDINGD
PLENPEQIVELRMQDVVIPYESGRYLVSICKYIDTLLEKFYGKTPFYNVKNSEELIGHLI
IGLAPHTSVGIVGRIIGYSETHVCFATPNWHSAKRRDADGDADSIMLLMDSLLNFSRQFL
SDAIGGLMDAPLLIQPLVLPHESQPQAHNLEVTKSLPLEFFESTIQQVKAPDISSVEIIK
SRLETERQFYDYYFTHSTSSLTTSKSRSAYSTLGSMLDKFDMQVKNAELIDAVNTSEIVS
DVISTHLVPDIMGNLRAYARQNFRCTGCGKSYRRMPLIQTCVCGHKLIPTITRGSVEKYL
KLAKRLVDKYDVSEYQRGRIHALSDEIELVFGKSPGDQSLLTDYA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaacgacgcaatttctcgtataagtggcataaaaatgcctgattattatctt
gattattactcgaatttatctgcagaaacgtactcaatttttgaagctgcagcatctgct
aaatcaagtctagtggactcatcaggtataattgagccgaaaatcgcatttgatctagca
gatcgtgtggctaaaatgcatgaaattgacattgccgaacccttacgtgaacttctaaaa
attaatggaaaagaactttcagcactgattctctcaaaagagattgcacagggaaaatat
tctttacctgattctactttggaagaaaaacttgatctggcagttcgggttggattggca
attgtaacagagggtgtcaccatagctcctttacaaggaataagtgaagtaaaaataaag
aaaaacaaggatggttctgattatctctcagtttctattgcaggcccaatgcgttcagct
ggagggacagaatctgcagttacaatgttgatagctgatcatgttagaaagactgcagga
ctgtcaaaatttcaagccaactcatttgatgatgaaacaggtcgatttgtagaggaatta
agaatctatgaaagggaggctagtagctttcaattccatatattagatgaagatattgaa
catgtgatttcaaatctaccagtagagttagacggcgtagatacagatccttatgaggtt
gtaaatcacaaatctatggtacgaattaagactgatcgggtacgtggaggtgccttacgt
gtcctaaatgatggtctaattggaagatccaaaaaactactaaaaagaattgaaatgtac
aatcttgatggttgggaatggctcaatgaccttaaaggagctgttcaaacaggtgaaaaa
caagaagacgcagctactaaaagaatgcatgaagtaattacaggaagatcagtcttatcc
atgcctaacaaactgggtggatttcgattaagatacggaagagcatgcaacaccggcttt
gcagcagttgggattcatcccgtaatagcagaaattcttgatcataccattgcagttgga
actcaaatcaaaattgatattccaggaaaaggctctactgttgcgtttgttgattcaatt
gaaactcccactgtccgcctgaaaaatggaaatgttgtaaagattcgggatgtgaaacat
ggaattgaaattaagaatgatattgaaaaaatacttcatcttggagatattctgatatcc
tttggagattttctagaaaacaatgctcaacttgtaccatcagcatatgtggaagaattt
tggatagaagaattaaaacaaaaaattcagaaatacgagcctgaagatcagtatctaact
caatttctcaacaaagttcccaccatagatgaggcattaaaaatctcccttgattttgat
atggctcttcatccacgctatctgtatttttgggataaaatttcctctgaagaactcaat
ctacttttagaacctaaaaaaatcaatgaaacatcaatcgaataccatatacaaataaaa
aaaattcttgaaaaattaggagttccacatgtagttgaaaatgacaacatcatacttgaa
aatcttgaggcaaaaattttctttaatttgttatttagagaaaaaccagaaattgacgaa
tcgtcaatccctcagataatttcaaaatcctctggaatcaaaattaaaaacaaattttct
acctcagttggggtaagaattggaagaccagaaaaagctgccccaagacagatgaagcca
ccaacacatgtattatttcctattagtgataaagggggaccaacaagagatcttctaaaa
gcatctaaaaatgagcactttttcacaagtatctacaacaggcattgtactcaatgtaac
caaccatcaattggaataaaatgctcaaaatgtggtataaaaacaactgttacctataga
tgtcctcattgcagagatacgcttgaagaatctttttgtaacaaatgtaaacgaaatgct
ttagcttactcacataaggaattcccattaaaatcaaaactccttgaagcacaagaaaag
attcgtttacgtgcacaagaaccattcaaaggagtaaaggaactaatcagtcaagataag
attgccgagcctttggaaaagggacttgtaagacaaaattttggtcttacagtattcaag
gatggaactgttcgatttgatgcaactaactcgcctctaactcaattcaaaccatcttgg
atcggaacctcaattgagaagctcaaagaattaggatattcacatgatattaatggtgac
ccacttgaaaatcctgaacagatagttgaactccgtatgcaggatgtagtaattccctat
gaaagtggcaggtatcttgtctctatttgtaaatacattgacacacttttagaaaaattc
tacggcaagactccattttacaatgtaaaaaattctgaggaattgattgggcatctaata
atcggtttggctcctcatacgtctgttggaattgttggtagaattattggatattctgaa
acccatgtctgttttgcaacccctaactggcattctgcaaaaagaagagacgcagatgga
gatgctgactcgattatgttgttgatggatagtcttttgaatttttcaaggcaattcctt
tcagatgctataggcggattgatggatgctccactgcttattcaacctcttgttttacca
cacgagtctcaacctcaagcacacaatcttgaggttacaaaatcacttcctctagaattt
tttgaatcaacgattcaacaagtcaaagcacctgacatctcttctgttgaaattatcaaa
tctcgacttgagacagaaagacaattttatgattattattttacacattcaacatcatct
cttaccacttcaaaatctcgcagtgcatattctactcttggttcaatgttggataaattt
gatatgcaagttaaaaatgctgaattgattgatgctgtaaatacctcagaaattgtttca
gatgtcatttcaactcaccttgttccagatattatgggcaatctaagagcatatgctaga
caaaattttaggtgtactggttgtggcaaatcttaccgccgaatgcccttaatccaaacc
tgcgtgtgtgggcacaaactaattcctacaataactcgtggttctgtagaaaaatatctg
aaacttgcaaaaagacttgttgacaaatatgatgttagtgaatatcagagaggaagaatt
catgcactttctgatgaaattgaattagtatttggaaagagccctggtgatcaatcactt
ctaactgactatgcttga
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