Nitrosopumilus piranensis: NPIRD3C_0257
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Entry
NPIRD3C_0257 CDS
T03656
Name
(GenBank) DNA-directed DNA polymerase
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
nid
Nitrosopumilus piranensis
Pathway
nid03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NPIRD3C_0257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nid03032
]
NPIRD3C_0257
Enzymes [BR:
nid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NPIRD3C_0257
DNA replication proteins [BR:
nid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
NPIRD3C_0257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJM91475
UniProt:
A0A0C5BWZ8
LinkDB
All DBs
Position
complement(240423..241868)
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AA seq
481 aa
AA seq
DB search
MKKELSFALNYALNKGFQIHPDAFKILENVDVKKLERVIKEIVREKTKQKLFQISQDDLE
TYLGIKDDPSLESEVQVLLDPTDKITTGEGVKGYNALFSSRFNKLKRIISDRPEARMLKS
LTFVKNERSKDDMYVCGLVTARNSERNVTKLVLEDPSGSFDGIIFDNELQKTADTLLLDQ
FVMARVSVGKNSGFIIKDLILPDIPDQATNKSESEAYAVFLSDLHIGSKYFMEEELTDFF
SWISSSDPTARKIRFILIGGDVVDGVGIYPNQNKELVCQTIEAQLKKVEELIEKIPKNIK
IIIMPGNHDPGRRALPQPAIPKKYNSGLWDRENVIMVGNPAVVSLNGVKVMMFHGQSIDD
IVKTTPGLSYDKPTNVMKHLLRARHLSPIYGSQTPIAPEMQDLMVIEDVPDIFHVGHVHK
AQLDMYKGMLLVNSGSWQKQTPFQASVGMTPNPGIALLVNLKTFQVFHQNYNSNLDNILQ
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggaattgtcctttgccttaaactatgcactaaataagggattccagattcat
cctgacgcttttaaaatattagaaaatgttgatgtaaaaaaactagagagagtaatcaaa
gaaattgttagagagaaaacaaaacagaaattgtttcagataagccaagatgatttagag
acgtatcttggaatcaaagatgacccatcattagaaagtgaagtgcaggtattgttagac
cccacagacaaaataaccactggggagggggtaaagggttacaatgcgttattttctagc
agatttaacaaattaaaacgaataatttcagataggccagaagctaggatgttaaagtct
ctgacttttgtaaaaaatgaaagatccaaagatgacatgtatgtttgtggattggtaact
gcaagaaatagtgagagaaatgtaacaaaattggttttagaggacccatcaggctcattt
gatgggattatttttgataatgagttacaaaagactgcagacacccttttgttagaccaa
tttgttatggctagagttagtgtaggaaaaaactctggattcatcataaaggatttgatt
ttgccagatattcctgatcaggctaccaacaagtccgagtctgaggcatatgcagtgttt
ttatctgatttgcatattgggagtaaatacttcatggaggaggaattaacagattttttt
tcatggatatccagttctgatcctactgcaagaaaaattcgatttattttgattggagga
gatgtggttgatggggttgggatctatccaaaccaaaacaaggaattggtatgccagacc
attgaagcgcagctcaaaaaggttgaagagttgattgaaaagatcccaaaaaacattaag
ataatcataatgcctggaaatcacgatcctggaagaagggctctcccccaaccagcaatt
ccaaaaaaatacaactcaggattgtgggatagggaaaatgtcattatggttggaaatccg
gctgttgtatcgctaaatggtgttaaggtgatgatgtttcatggacaaagtattgatgat
attgtaaagactacaccgggtctaagttatgacaagccaacaaatgtaatgaagcatttg
ttaagagcaagacacctaagtccaatttatggcagtcagaccccaattgcaccagaaatg
caagatcttatggttattgaggatgttccagatatctttcatgtagggcatgtccacaag
gctcagttagatatgtacaaaggaatgttattggtaaattcaggatcttggcaaaaacag
acaccttttcaagccagtgtgggaatgaccccaaatccaggcattgcgttgctggttaat
ttgaagactttccaggttttccatcaaaattacaattctaatttagacaatatcttgcaa
agttag
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