Nitrosopumilus piranensis: NPIRD3C_0447
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Entry
NPIRD3C_0447 CDS
T03656
Symbol
tfe
Name
(GenBank) Transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nid
Nitrosopumilus piranensis
Pathway
nid03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NPIRD3C_0447 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nid03021
]
NPIRD3C_0447 (tfe)
Transcription machinery [BR:
nid03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
NPIRD3C_0447 (tfe)
Prokaryotic type
Archaeal type
TFE
NPIRD3C_0447 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
TrmB
DUF7086
Sigma70_r3
Zn_ribbon_RRN7
IBR
Zn_ribbon_3
zf-C3HC
Zn_ribbon_recom
zf_CopZ
Motif
Other DBs
NCBI-ProteinID:
AJM91663
UniProt:
A0A0C5BPM7
LinkDB
All DBs
Position
complement(386183..386698)
Genome browser
AA seq
171 aa
AA seq
DB search
MVDKYEDPFVRIASMIGGDEYLKVARSLLKAEDATDEEIASSTGLRINMVRKVLYDLFGK
SLITGIRVKDERKGWFVYRWRTRREEVEHFIENQKKKIEERLQQRLDYENASDFYHCGNE
DCPRVTFEDALEGMFKCPSCGNVLNLKKNDKSKKAYQKKIDEIKKDMQQIF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttggtagacaaatacgaagatccttttgttagaatagcctcaatgattggaggagatgaa
tatctcaaagtagctcgttcattactaaaagcagaagatgcaactgatgaagaaattgca
agttcaacagggcttagaatcaatatggtaagaaaagtattgtatgatctttttggaaaa
tccctaatcacagggattagagtaaaagatgagagaaaggggtggtttgtttacagatgg
agaacaagaagagaagaagttgaacattttattgaaaatcagaaaaagaaaattgaagag
agattacaacaaagattagattatgaaaatgcatctgatttttatcattgtggaaatgaa
gattgtccaagagtaacctttgaagatgcacttgaaggtatgttcaaatgtccatcatgc
ggaaatgttctaaatctaaaaaagaacgataagtctaaaaaggcatatcaaaagaaaatt
gatgaaatcaaaaaagatatgcagcagattttctaa
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