Nitrosopumilus piranensis: NPIRD3C_0648
Help
Entry
NPIRD3C_0648 CDS
T03656
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit/fumarate reductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nid
Nitrosopumilus piranensis
Pathway
nid00020
Citrate cycle (TCA cycle)
nid00190
Oxidative phosphorylation
nid00650
Butanoate metabolism
nid00720
Other carbon fixation pathways
nid01100
Metabolic pathways
nid01110
Biosynthesis of secondary metabolites
nid01120
Microbial metabolism in diverse environments
nid01200
Carbon metabolism
Module
nid_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NPIRD3C_0648 (sdhA)
00650 Butanoate metabolism
NPIRD3C_0648 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NPIRD3C_0648 (sdhA)
00720 Other carbon fixation pathways
NPIRD3C_0648 (sdhA)
Enzymes [BR:
nid01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NPIRD3C_0648 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
Thi4
FAD_oxidored
GIDA
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AJM91862
UniProt:
A0A0C5C9I2
LinkDB
All DBs
Position
539114..540826
Genome browser
AA seq
570 aa
AA seq
DB search
MVDSIEFDLIICGSGLAGLRAAIAAAKKGPNLKIGIVSKLQVMRSHSVSAEGGTAAVIQE
DAGDTIESHVYDTVKGSDFLADQDVAERLCVEMPQEIHQLDHWGMPWSRKEDGRIDQRNF
GGYSFPRATYASDKVGFFEMQTLYDTCQKFENIEYLNEWFATSIIHNGKKFMGLTAIELG
SGTFYTIKGKALIIATGGAGRLYSFSTYALSSTPDGLDMGLRAGMALKDMEFVQFHPTGI
LPSGILITEGARGEGGYLLNNKGERFMKNYAAEKMELAPRDIVSRSIMTEIKEGRGFKHE
TGVDCMKLDLRHIGDEKIKEKLGGIREISIKFSGLDPAQELLDIRPVCHYMMGGLHTDID
GATEIQGVWAAGEAACNSVHGSNRLGANSTSECIVWGKITGELAAEYAMKNTTADQWPHH
LVAAEEKRIYDGIFRGNGDANPYEIRQELTDTMNEKAYVYRNETDLVAGLKRIRELKAQT
WKHVDDKAKEYNTNFSNVMELDSMFRVAEIVLIGAINRKESRGAHARTDYTKRDDANFLH
HTLAYYDPNEPIMKTHPVTITKYQPVERKY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtcgattcaattgagtttgatttgataatttgtggttctggcttagctggtcttaga
gcagcaattgcagctgcaaaaaaaggaccgaatctgaaaatcggtattgtatcaaaatta
caagtaatgcgttctcattctgtttcagcagaaggtggaactgctgcagtaattcaagaa
gatgcaggggatacaattgaatctcatgtttatgatactgtaaagggcagtgactttctt
gcagaccaagatgttgcagaaagactttgtgttgagatgccccaagaaattcatcagttg
gaccattggggtatgccatggtctagaaaagaagatggaagaattgatcaaagaaacttt
ggtggttatagttttcctagagcaacttatgcatcagacaaagttggtttctttgaaatg
caaaccttgtatgacacttgtcagaaatttgaaaatattgaatatcttaacgaatggttt
gcaacatcaattattcataatggaaaaaaattcatgggtcttactgcaattgaattaggt
tcgggaacattttacacaattaaaggaaaagctctcattattgcaactggtggtgctgga
agactgtatagtttttcaacctatgcattatcttcaactcctgatggcttggatatggga
ttacgtgctggcatggcactaaaagatatggagtttgtacaattccatcctactggtatt
ttaccatctggaattttaattactgaaggtgcaagaggagaaggcggttatcttcttaac
aacaaaggtgaacgattcatgaaaaattatgcagctgagaagatggaattagctccacgt
gatattgtttcaagatcaataatgacggaaatcaaagagggccgtggattcaagcatgaa
actggtgttgattgtatgaaacttgatttgcgacatattggtgatgaaaagatcaaagag
aaattaggtggaattagagaaatctccatcaagttttcaggacttgatcctgctcaagaa
ttacttgacattagacctgtatgtcattacatgatgggtggactccatactgatattgat
ggtgcaacagaaatccaaggtgtttgggcggcaggtgaggctgcatgtaatagtgttcat
ggatcaaatagactaggtgcaaactctacctcagaatgtatagtttggggtaaaatcaca
ggtgaattggcagctgaatatgcaatgaaaaatactactgcagatcaatggcctcatcac
ttggttgcagcagaagagaagcgaatctatgatggaatctttaggggaaatggagatgca
aatccatatgaaattagacaagaattaactgatacaatgaatgagaaagcatacgtttac
agaaacgaaactgatcttgttgcaggtcttaagagaatacgtgagcttaaagcacagact
tggaaacatgttgatgataaagcaaaagagtacaacacaaacttttcaaatgtgatggaa
cttgattctatgttcagagtagctgagattgtattaattggtgcaattaatagaaaagaa
tctcgtggtgcacatgcaagaactgactatactaaaagagacgatgcaaactttttgcac
cacacacttgcctattatgatccaaatgaacccatcatgaaaacacatccagtaacaatc
actaagtatcagcctgtggagagaaaatactag
DBGET
integrated database retrieval system
